Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 BX890604.2-201ENST00000427883 474 ntBASIC5.69□□□□□ -1.5
IFT140Q96RY7 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.69□□□□□ -1.5
IFT140Q96RY7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.69□□□□□ -1.5
IFT140Q96RY7 RPL32P28-201ENST00000443577 397 ntBASIC5.69□□□□□ -1.5
IFT140Q96RY7 RPL31P50-201ENST00000471002 296 ntBASIC5.69□□□□□ -1.5
IFT140Q96RY7 AC021146.3-201ENST00000511911 260 ntBASIC5.69□□□□□ -1.5
IFT140Q96RY7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.69□□□□□ -1.5
IFT140Q96RY7 AC022080.3-201ENST00000544433 482 ntBASIC5.69□□□□□ -1.5
IFT140Q96RY7 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.69□□□□□ -1.5
IFT140Q96RY7 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.69□□□□□ -1.5
IFT140Q96RY7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.69□□□□□ -1.5
IFT140Q96RY7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.69□□□□□ -1.5
IFT140Q96RY7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
IFT140Q96RY7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
IFT140Q96RY7 BTBD10P1-201ENST00000549824 1352 ntBASIC5.68□□□□□ -1.5
IFT140Q96RY7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
IFT140Q96RY7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.68□□□□□ -1.5
IFT140Q96RY7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
IFT140Q96RY7 OR6K4P-201ENST00000423179 955 ntBASIC5.68□□□□□ -1.5
IFT140Q96RY7 AL513175.1-201ENST00000431492 780 ntBASIC5.68□□□□□ -1.5
IFT140Q96RY7 TPTE2P3-201ENST00000441562 1189 ntBASIC5.68□□□□□ -1.5
IFT140Q96RY7 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.68□□□□□ -1.5
IFT140Q96RY7 AC140076.1-201ENST00000449897 361 ntBASIC5.68□□□□□ -1.5
IFT140Q96RY7 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.68□□□□□ -1.5
IFT140Q96RY7 RN7SL863P-201ENST00000462370 296 ntBASIC5.68□□□□□ -1.5
IFT140Q96RY7 ASNSP4-201ENST00000511103 447 ntBASIC5.68□□□□□ -1.5
IFT140Q96RY7 snoU109.6-201ENST00000516831 118 ntBASIC5.68□□□□□ -1.5
IFT140Q96RY7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC5.68□□□□□ -1.5
IFT140Q96RY7 AL390838.2-201ENST00000602394 274 ntBASIC5.68□□□□□ -1.5
IFT140Q96RY7 AC006557.5-201ENST00000603126 811 ntBASIC5.68□□□□□ -1.5
IFT140Q96RY7 AL049844.2-201ENST00000604280 628 ntBASIC5.68□□□□□ -1.5
IFT140Q96RY7 OR2AS2P-201ENST00000606902 342 ntBASIC5.68□□□□□ -1.5
IFT140Q96RY7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.68□□□□□ -1.5
IFT140Q96RY7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
IFT140Q96RY7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
IFT140Q96RY7 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
IFT140Q96RY7 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
IFT140Q96RY7 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.67□□□□□ -1.5
IFT140Q96RY7 AL356535.1-201ENST00000440335 398 ntBASIC5.67□□□□□ -1.5
IFT140Q96RY7 RPL7P59-201ENST00000447700 943 ntBASIC5.67□□□□□ -1.5
IFT140Q96RY7 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
IFT140Q96RY7 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.67□□□□□ -1.5
IFT140Q96RY7 RN7SKP209-201ENST00000516888 304 ntBASIC5.67□□□□□ -1.5
IFT140Q96RY7 AL157394.1-201ENST00000562983 1224 ntBASIC5.67□□□□□ -1.5
IFT140Q96RY7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.67□□□□□ -1.5
IFT140Q96RY7 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.67□□□□□ -1.5
IFT140Q96RY7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
IFT140Q96RY7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.67□□□□□ -1.5
IFT140Q96RY7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
IFT140Q96RY7 AC015813.6-201ENST00000624409 5808 ntBASIC5.66□□□□□ -1.5
IFT140Q96RY7 AC116096.1-201ENST00000566804 2314 ntBASIC5.66□□□□□ -1.5
IFT140Q96RY7 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.66□□□□□ -1.5
IFT140Q96RY7 NMD3P1-201ENST00000439704 1488 ntBASIC5.66□□□□□ -1.5
IFT140Q96RY7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.66□□□□□ -1.5
IFT140Q96RY7 RNA5SP235-201ENST00000365411 114 ntBASIC5.66□□□□□ -1.5
IFT140Q96RY7 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
IFT140Q96RY7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.66□□□□□ -1.5
IFT140Q96RY7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.66□□□□□ -1.5
IFT140Q96RY7 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.66□□□□□ -1.5
IFT140Q96RY7 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.66□□□□□ -1.5
IFT140Q96RY7 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.66□□□□□ -1.5
IFT140Q96RY7 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.66□□□□□ -1.5
IFT140Q96RY7 MTND6P33-201ENST00000571794 183 ntBASIC5.66□□□□□ -1.5
IFT140Q96RY7 AC136601.2-201ENST00000604356 474 ntBASIC5.66□□□□□ -1.5
IFT140Q96RY7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.66□□□□□ -1.5
IFT140Q96RY7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
IFT140Q96RY7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
IFT140Q96RY7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC5.66□□□□□ -1.5
IFT140Q96RY7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
IFT140Q96RY7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
IFT140Q96RY7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.66□□□□□ -1.5
IFT140Q96RY7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
IFT140Q96RY7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC5.66□□□□□ -1.5
IFT140Q96RY7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
IFT140Q96RY7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
IFT140Q96RY7 HCFC2P1-201ENST00000392864 1592 ntBASIC5.65□□□□□ -1.5
IFT140Q96RY7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
IFT140Q96RY7 RPS20P1-201ENST00000434853 354 ntBASIC5.65□□□□□ -1.5
IFT140Q96RY7 AC112198.1-201ENST00000505369 1220 ntBASIC5.65□□□□□ -1.5
IFT140Q96RY7 PSMA2P1-201ENST00000526365 646 ntBASIC5.65□□□□□ -1.5
IFT140Q96RY7 MRPS35P3-201ENST00000603189 709 ntBASIC5.65□□□□□ -1.5
IFT140Q96RY7 AC103881.1-201ENST00000603476 538 ntBASIC5.65□□□□□ -1.5
IFT140Q96RY7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
IFT140Q96RY7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
IFT140Q96RY7 DDX18P4-201ENST00000511690 1966 ntBASIC5.65□□□□□ -1.5
IFT140Q96RY7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
IFT140Q96RY7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
IFT140Q96RY7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
IFT140Q96RY7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
IFT140Q96RY7 AC007656.2-201ENST00000624902 4547 ntBASIC5.65□□□□□ -1.51
IFT140Q96RY7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
IFT140Q96RY7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
IFT140Q96RY7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
IFT140Q96RY7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
IFT140Q96RY7 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.64□□□□□ -1.51
IFT140Q96RY7 SETP5-201ENST00000437270 562 ntBASIC5.64□□□□□ -1.51
IFT140Q96RY7 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.64□□□□□ -1.51
IFT140Q96RY7 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.64□□□□□ -1.51
IFT140Q96RY7 AC091826.1-201ENST00000514065 313 ntBASIC5.64□□□□□ -1.51
IFT140Q96RY7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms