Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 SNORA48.7-201ENST00000391302 135 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 AC013404.1-201ENST00000413068 249 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 OR5AW1P-201ENST00000426334 1006 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 HMGB3P5-201ENST00000428894 612 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 AC091959.2-201ENST00000477363 321 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 SAP18P1-201ENST00000512058 390 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 IGKV2D-23-201ENST00000518179 286 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 AL121576.1-201ENST00000556055 276 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 AC009101.1-201ENST00000568135 242 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 AC120057.2-201ENST00000571520 271 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 MIR4458-201ENST00000578872 75 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 AL451086.1-201ENST00000605596 223 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 AL391597.1-201ENST00000618707 694 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 AC116563.2-201ENST00000624751 535 ntBASIC3.91□□□□□ -1.78
C9orf72Q96LT7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
C9orf72Q96LT7 AC106871.1-201ENST00000568324 3102 ntBASIC3.9□□□□□ -1.78
C9orf72Q96LT7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
C9orf72Q96LT7 AC096656.1-201ENST00000623826 1364 ntBASIC3.9□□□□□ -1.78
C9orf72Q96LT7 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
C9orf72Q96LT7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.9□□□□□ -1.78
C9orf72Q96LT7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
C9orf72Q96LT7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
C9orf72Q96LT7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
C9orf72Q96LT7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.9□□□□□ -1.78
C9orf72Q96LT7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
C9orf72Q96LT7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
C9orf72Q96LT7 RN7SKP159-201ENST00000410657 292 ntBASIC3.9□□□□□ -1.79
C9orf72Q96LT7 RNA5SP498-201ENST00000411342 120 ntBASIC3.9□□□□□ -1.79
C9orf72Q96LT7 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
C9orf72Q96LT7 RPL7P53-201ENST00000421245 739 ntBASIC3.9□□□□□ -1.79
C9orf72Q96LT7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.9□□□□□ -1.79
C9orf72Q96LT7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.9□□□□□ -1.79
C9orf72Q96LT7 AL627224.1-201ENST00000448334 444 ntBASIC3.9□□□□□ -1.79
C9orf72Q96LT7 AC010683.1-201ENST00000473673 378 ntBASIC3.9□□□□□ -1.79
C9orf72Q96LT7 AC068305.1-201ENST00000497406 726 ntBASIC3.9□□□□□ -1.79
C9orf72Q96LT7 PCNAP1-201ENST00000505363 709 ntBASIC3.9□□□□□ -1.79
C9orf72Q96LT7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
C9orf72Q96LT7 AC092851.1-201ENST00000535964 478 ntBASIC3.9□□□□□ -1.79
C9orf72Q96LT7 EIF1AXP2-201ENST00000555940 413 ntBASIC3.9□□□□□ -1.79
C9orf72Q96LT7 AL137849.1-201ENST00000604767 169 ntBASIC3.9□□□□□ -1.79
C9orf72Q96LT7 AC090912.3-201ENST00000609775 533 ntBASIC3.9□□□□□ -1.79
C9orf72Q96LT7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
C9orf72Q96LT7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.9□□□□□ -1.79
C9orf72Q96LT7 OR6C71P-202ENST00000641886 1107 ntBASIC3.9□□□□□ -1.79
C9orf72Q96LT7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
C9orf72Q96LT7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
C9orf72Q96LT7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.79
C9orf72Q96LT7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 HSPA8P1-201ENST00000425843 1833 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 MIR423-201ENST00000362201 94 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 RNU6-31P-201ENST00000384388 108 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 RNF19BPX-201ENST00000426224 625 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 RPS26P40-201ENST00000435209 294 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 SNORA84-201ENST00000459229 133 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 RPL7P48-201ENST00000461513 746 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 PPIAP15-201ENST00000479662 484 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 RPL21P129-201ENST00000491732 478 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 RAC1P2-201ENST00000511164 579 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 FTH1P9-201ENST00000513251 355 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AC023632.4-201ENST00000517783 191 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AC005255.1-201ENST00000593748 216 ntBASIC3.89□□□□□ -1.79
C9orf72Q96LT7 AL133247.2-201ENST00000603236 482 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms