Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 CEACAMP9-201ENST00000442990 513 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 AL162591.2-201ENST00000449634 317 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 OR51B8P-201ENST00000449892 769 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 CYCSP53-201ENST00000455540 265 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VMP1Q96GC9 AC104763.1-201ENST00000475274 360 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 AC006499.6-201ENST00000511169 607 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 AC090151.1-201ENST00000520784 730 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VMP1Q96GC9 AC092851.1-201ENST00000535964 478 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 AC105129.1-201ENST00000560250 297 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 CYP2C60P-201ENST00000566088 139 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 AC009101.1-201ENST00000568135 242 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 MIR4789-201ENST00000577469 82 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 SNRPGP15-201ENST00000600149 222 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 AC009948.4-201ENST00000604692 675 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 AP005229.2-201ENST00000609980 697 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 MIR4727-201ENST00000622232 55 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 U3.53-201ENST00000628922 216 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 SGO1P1-201ENST00000603525 1447 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 AC108467.2-201ENST00000617640 1597 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.34□□□□□ -1.72
VMP1Q96GC9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VMP1Q96GC9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VMP1Q96GC9 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VMP1Q96GC9 MTND5P31-201ENST00000419366 1374 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 ZNF37BP-203ENST00000452306 1352 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VMP1Q96GC9 SNORD113.2-201ENST00000364166 89 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VMP1Q96GC9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VMP1Q96GC9 U6.112-201ENST00000384129 70 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 SNORA70F-201ENST00000384142 135 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 HSPE1P26-201ENST00000405341 275 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 OR51B3P-201ENST00000412287 913 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 P2RY10P2-201ENST00000416730 913 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 SKP1P3-201ENST00000429280 487 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 RPL21P112-201ENST00000434403 463 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 CYCSP43-201ENST00000438233 310 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VMP1Q96GC9 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 NDUFA12P1-201ENST00000455914 406 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 RPS29P33-201ENST00000456717 146 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 SNRPGP3-201ENST00000469405 227 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 AC091959.2-201ENST00000477363 321 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 SNORA26.10-201ENST00000516427 141 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 AC008694.2-201ENST00000517591 306 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 IGLV3-26-201ENST00000520756 302 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VMP1Q96GC9 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 AC107954.1-201ENST00000565906 727 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 AC074051.3-201ENST00000570238 358 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 AL133338.2-201ENST00000604292 736 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 AC019193.2-201ENST00000610012 634 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 AC005156.1-201ENST00000613371 573 ntBASIC4.33□□□□□ -1.72
VMP1Q96GC9 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VMP1Q96GC9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.33□□□□□ -1.72
VMP1Q96GC9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.32□□□□□ -1.72
VMP1Q96GC9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
VMP1Q96GC9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VMP1Q96GC9 AC125257.1-201ENST00000560400 2930 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms