Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTP4Q96DX8 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTP4Q96DX8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC008033.1-201ENST00000216407 1162 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC097374.1-203ENST00000400783 485 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 TAF13P2-201ENST00000416876 286 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC011233.1-201ENST00000422812 283 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC234779.1-201ENST00000425910 285 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AL365396.1-201ENST00000430854 671 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AL445567.1-201ENST00000439121 144 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 MTCYBP42-201ENST00000444653 1130 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 CASP3P1-201ENST00000446037 609 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 EXTL2P1-201ENST00000446218 416 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AL050341.1-201ENST00000447743 313 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 MRPL35P4-201ENST00000453682 566 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 RPL7AP28-201ENST00000464513 571 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC021205.1-201ENST00000468797 348 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 MTND2P14-201ENST00000482139 351 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC104164.2-201ENST00000496953 495 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC025674.1-201ENST00000507074 324 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC010306.1-201ENST00000523223 1117 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AP000926.4-201ENST00000527351 454 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 OR5AK3P-201ENST00000527486 1297 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 OR5BC1P-201ENST00000529327 739 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 DEFB130C-202ENST00000530001 230 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTP4Q96DX8 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC068831.4-201ENST00000556118 109 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC122134.1-201ENST00000565664 1104 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 MIR4675-201ENST00000577898 77 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 VN1R83P-201ENST00000595685 445 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC018638.7-201ENST00000605836 1114 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC016877.3-201ENST00000606778 504 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC012409.3-201ENST00000611343 981 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AL392048.1-201ENST00000613946 534 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AL021997.2-201ENST00000615674 271 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 MFSD8-242ENST00000641690 4199 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 MTCO1P7-201ENST00000419523 1542 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
RTP4Q96DX8 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTP4Q96DX8 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RTP4Q96DX8 RAD17P1-201ENST00000418130 2042 ntBASIC4.45□□□□□ -1.7
RTP4Q96DX8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTP4Q96DX8 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTP4Q96DX8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RTP4Q96DX8 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RTP4Q96DX8 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RTP4Q96DX8 OR5P1P-201ENST00000299512 925 ntBASIC4.44□□□□□ -1.7
RTP4Q96DX8 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTP4Q96DX8 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTP4Q96DX8 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RTP4Q96DX8 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
RTP4Q96DX8 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.44□□□□□ -1.7
RTP4Q96DX8 RAP1BP1-201ENST00000412709 553 ntBASIC4.44□□□□□ -1.7
RTP4Q96DX8 AL358176.3-201ENST00000420757 454 ntBASIC4.44□□□□□ -1.7
RTP4Q96DX8 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.44□□□□□ -1.7
RTP4Q96DX8 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.44□□□□□ -1.7
RTP4Q96DX8 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.44□□□□□ -1.7
RTP4Q96DX8 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.44□□□□□ -1.7
RTP4Q96DX8 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.44□□□□□ -1.7
RTP4Q96DX8 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.44□□□□□ -1.7
RTP4Q96DX8 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RTP4Q96DX8 CACYBPP1-201ENST00000438592 684 ntBASIC4.44□□□□□ -1.7
RTP4Q96DX8 AC097499.1-201ENST00000444277 208 ntBASIC4.44□□□□□ -1.7
RTP4Q96DX8 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.44□□□□□ -1.7
RTP4Q96DX8 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RTP4Q96DX8 AC233982.1-201ENST00000451247 436 ntBASIC4.44□□□□□ -1.7
RTP4Q96DX8 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.44□□□□□ -1.7
RTP4Q96DX8 RPL23AP44-201ENST00000482216 473 ntBASIC4.44□□□□□ -1.7
RTP4Q96DX8 NIP7P2-201ENST00000485801 544 ntBASIC4.44□□□□□ -1.7
RTP4Q96DX8 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.44□□□□□ -1.7
RTP4Q96DX8 AC108145.1-201ENST00000503770 153 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms