Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 OR7E13P-201ENST00000526052 910 ntBASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 AC092747.2-201ENST00000545069 983 ntBASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 RNU1-30P-201ENST00000606575 163 ntBASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 OR8B1P-202ENST00000641132 1178 ntBASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 CEP170P1-201ENST00000502249 4587 ntBASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.32□□□□□ -1.88
FNDC9Q8TBE3 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 CR381670.1-201ENST00000624291 1693 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 Y_RNA.62-201ENST00000362840 99 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 RNA5SP51-201ENST00000364750 119 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 RNU4-7P-201ENST00000364758 141 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 RNU6-603P-201ENST00000411403 107 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 AL389915.1-201ENST00000422463 466 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 HIGD1AP12-201ENST00000427832 281 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 VN1R34P-201ENST00000447387 883 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 AL157884.3-201ENST00000448273 1184 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 AC006480.1-201ENST00000449887 378 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 RPL7P31-201ENST00000450192 724 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 SLC25A15P5-201ENST00000508033 253 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 RNU4-18P-201ENST00000516751 149 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 AC026403.1-201ENST00000518938 295 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 AC006960.3-201ENST00000561845 705 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 AL163642.2-201ENST00000604722 1019 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 AL034351.1-201ENST00000605288 668 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 AC119674.1-207ENST00000641355 633 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 AL139811.1-201ENST00000424779 2299 ntBASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
FNDC9Q8TBE3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 HSPE1P8-201ENST00000406997 288 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AC069157.1-201ENST00000421749 137 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 RPS26P40-201ENST00000435209 294 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 EXTL2P1-201ENST00000446218 416 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 RPS3AP46-201ENST00000448352 682 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 OR6C72P-201ENST00000451403 892 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AC104619.4-201ENST00000510773 249 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AC008011.1-201ENST00000545989 227 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 CBX3P5-201ENST00000552017 521 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AL390816.3-201ENST00000604527 1066 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 Z82195.1-201ENST00000604558 398 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 BRDTP1-201ENST00000605735 677 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 SNORA51-201ENST00000606420 132 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AL592494.3-201ENST00000609485 464 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AC091905.1-201ENST00000624400 311 ntBASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
FNDC9Q8TBE3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms