Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 AL773545.4-201ENST00000637262 310 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 AL513478.4-201ENST00000641636 310 ntBASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
C9orf40Q8IXQ3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AL031985.3-201ENST00000565390 2449 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 RNA5SP399-201ENST00000364003 117 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 OR8F1P-201ENST00000425243 930 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC093422.3-201ENST00000428506 305 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AL158053.1-201ENST00000441503 453 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 MTND2P8-201ENST00000450555 1025 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 FABP3P2-201ENST00000453169 399 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 RPS4XP15-201ENST00000489210 795 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC091516.1-201ENST00000549191 703 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC084824.1-201ENST00000550917 1005 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC018552.3-201ENST00000567416 561 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC124283.4-201ENST00000581815 456 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 VN1R85P-201ENST00000601587 426 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AP005229.2-201ENST00000609980 697 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC233309.1-201ENST00000619522 751 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AL359715.5-201ENST00000623431 443 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC132825.7-201ENST00000638744 335 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC018555.1-201ENST00000567548 1980 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AC009229.4-201ENST00000623854 1947 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 MTND4P31-201ENST00000425607 1343 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 AL136520.1-201ENST00000600311 1322 ntBASIC3.7□□□□□ -1.82
C9orf40Q8IXQ3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AL445437.1-201ENST00000623157 3087 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 RNA5SP27-201ENST00000363839 119 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 MIR1251-201ENST00000408552 70 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC009965.2-201ENST00000425328 970 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 MTCO1P54-201ENST00000430139 712 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC006994.1-201ENST00000438212 839 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 TPTE2P6-202ENST00000445572 1007 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 TPMTP4-201ENST00000450749 678 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 RN7SL271P-201ENST00000487601 295 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AC010285.3-201ENST00000511668 676 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.69□□□□□ -1.82
C9orf40Q8IXQ3 AP003717.3-201ENST00000544832 1180 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms