Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SETP7-201ENST00000552169 453 ntBASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 DPPA3P2-201ENST00000553589 478 ntBASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 MIR5095-201ENST00000578844 88 ntBASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 AL355297.3-201ENST00000604082 446 ntBASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 AC009237.17-201ENST00000618111 748 ntBASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
NPAS3Q8IXF0 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AC110597.1-201ENST00000562669 3176 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 OR11H5P-202ENST00000641612 1325 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 RNU6-492P-201ENST00000363035 104 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 RNU6-289P-201ENST00000364093 107 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 Y_RNA.464-201ENST00000384282 110 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 RNU6-606P-201ENST00000384721 111 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AL096800.1-201ENST00000405326 893 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 RNU2-23P-201ENST00000410545 195 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 RNU6-193P-201ENST00000410977 107 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AL158073.1-201ENST00000426848 1104 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 EIF1P2-201ENST00000428233 350 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 MTND6P12-201ENST00000428247 522 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 RPS3AP46-201ENST00000448352 682 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AC002553.3-201ENST00000453002 341 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 NXT1P1-201ENST00000458481 316 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 RNU7-66P-201ENST00000459469 62 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 RNU7-157P-201ENST00000459600 66 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AC007998.1-201ENST00000474156 672 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 RPS4XP18-201ENST00000495480 763 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 RPSAP51-201ENST00000497462 645 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 SNORD46.2-201ENST00000516021 102 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AC068993.1-201ENST00000546724 589 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AC068831.4-201ENST00000556118 109 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AL031176.1-201ENST00000604554 466 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 AL596244.1-201ENST00000567068 3779 ntBASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
NPAS3Q8IXF0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 AC105114.1-201ENST00000624795 1862 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 SNORA21-201ENST00000362423 132 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 RNA5SP273-201ENST00000362484 113 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 Y_RNA.25-201ENST00000362528 102 ntBASIC6.54□□□□□ -1.36
NPAS3Q8IXF0 RNU6-522P-201ENST00000364497 107 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms