Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RPS4XP13-201ENST00000483219 789 ntBASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.37□□□□□ -2.03
CSMD3Q7Z407 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 MIR504-201ENST00000385065 83 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 AC099563.1-201ENST00000456086 418 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 AC021146.3-201ENST00000511911 260 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 AL360157.1-201ENST00000565962 87 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 AC007390.2-201ENST00000606229 3803 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 BMS1P21-201ENST00000634565 365 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 AC007529.1-201ENST00000418574 2178 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 OR5H2-201ENST00000355273 945 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 MIR422A-201ENST00000362286 90 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 SRIP2-201ENST00000428470 166 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 MRPS33P4-201ENST00000434892 317 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 AC069285.2-201ENST00000440210 275 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 AC112503.1-201ENST00000608436 391 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 AL590240.3-201ENST00000621416 943 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC2.36□□□□□ -2.03
CSMD3Q7Z407 TCP1P3-201ENST00000414406 1498 ntBASIC2.36□□□□□ -2.03
CSMD3Q7Z407 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AC009963.1-201ENST00000417265 157 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AC112198.1-201ENST00000505369 1220 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 MIR7851-201ENST00000610611 160 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AL137790.1-201ENST00000634283 177 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AL353600.1-201ENST00000608148 251 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AL773545.4-201ENST00000637262 310 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AL513478.4-201ENST00000641636 310 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 RN7SL863P-201ENST00000462370 296 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AC068724.1-201ENST00000487100 792 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 TRBV12-2-201ENST00000489763 344 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 OR4A12P-201ENST00000530847 918 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 HIGD1AP1-201ENST00000550979 275 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AL133457.1-201ENST00000564251 987 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 CR383658.2-201ENST00000547576 1525 ntBASIC2.35□□□□□ -2.03
CSMD3Q7Z407 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD3Q7Z407 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms