Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.68□□□□□ -1.82
AP1S1P61966 AC020914.6-201ENST00000594327 272 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 KLKP1-201ENST00000595979 403 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S1P61966 AL049844.2-201ENST00000604280 628 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 AC090953.1-201ENST00000604305 1092 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 AC115621.1-201ENST00000604653 858 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 U7.8-201ENST00000619968 63 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 CFTRP2-201ENST00000634304 199 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 AC012442.3-202ENST00000636742 206 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
AP1S1P61966 AL732372.2-225ENST00000642124 456 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S1P61966 AC090229.1-201ENST00000590983 1609 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S1P61966 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.68□□□□□ -1.82
AP1S1P61966 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S1P61966 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S1P61966 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
AP1S1P61966 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S1P61966 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S1P61966 USP8P1-201ENST00000494673 3183 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S1P61966 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S1P61966 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
AP1S1P61966 RNU1-18P-201ENST00000363062 164 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 U3.15-201ENST00000365398 212 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 AL359837.1-201ENST00000381357 287 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 PTMAP2-201ENST00000397627 327 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 AL136131.1-201ENST00000406079 803 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 AC022022.1-201ENST00000430304 178 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 MOB1AP1-201ENST00000430903 535 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.67□□□□□ -1.82
AP1S1P61966 AL645931.1-201ENST00000439737 410 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.67□□□□□ -1.82
AP1S1P61966 Z95327.1-201ENST00000446082 482 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 OR52Y1P-201ENST00000452418 828 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 HMGB3P21-201ENST00000452483 547 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 RPL23AP62-201ENST00000463396 453 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
AP1S1P61966 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.67□□□□□ -1.82
AP1S1P61966 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC3.67□□□□□ -1.82
AP1S1P61966 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.67□□□□□ -1.82
AP1S1P61966 AC008489.1-201ENST00000524271 483 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 GTF2IP22-201ENST00000554443 182 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.67□□□□□ -1.82
AP1S1P61966 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.67□□□□□ -1.82
AP1S1P61966 AC069209.1-201ENST00000619282 651 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S1P61966 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.67□□□□□ -1.82
AP1S1P61966 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
AP1S1P61966 AC092079.1-201ENST00000558620 1985 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S1P61966 RPS4XP5-202ENST00000449995 1334 ntBASIC3.67□□□□□ -1.82
AP1S1P61966 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S1P61966 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S1P61966 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
AP1S1P61966 SAGE2P-201ENST00000420011 2126 ntBASIC3.66□□□□□ -1.82
AP1S1P61966 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S1P61966 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.66□□□□□ -1.82
AP1S1P61966 CEACAMP4-201ENST00000457676 421 ntBASIC3.66□□□□□ -1.82
AP1S1P61966 TRAV31-201ENST00000502780 342 ntBASIC3.66□□□□□ -1.82
AP1S1P61966 RNU6-579P-201ENST00000516879 102 ntBASIC3.66□□□□□ -1.82
AP1S1P61966 RNU6-943P-201ENST00000516960 98 ntBASIC3.66□□□□□ -1.82
AP1S1P61966 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.66□□□□□ -1.82
AP1S1P61966 AC026403.1-201ENST00000518938 295 ntBASIC3.66□□□□□ -1.82
AP1S1P61966 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.66□□□□□ -1.82
AP1S1P61966 AP000926.4-201ENST00000527351 454 ntBASIC3.66□□□□□ -1.82
AP1S1P61966 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.66□□□□□ -1.82
AP1S1P61966 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S1P61966 AC023161.2-201ENST00000551218 780 ntBASIC3.66□□□□□ -1.82
AP1S1P61966 MIR5047-201ENST00000579212 100 ntBASIC3.66□□□□□ -1.82
AP1S1P61966 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.66□□□□□ -1.82
AP1S1P61966 AC245389.1-201ENST00000605141 529 ntBASIC3.66□□□□□ -1.82
AP1S1P61966 AC119674.1-207ENST00000641355 633 ntBASIC3.66□□□□□ -1.82
AP1S1P61966 CEP170P1-201ENST00000502249 4587 ntBASIC3.66□□□□□ -1.82
AP1S1P61966 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.66□□□□□ -1.82
AP1S1P61966 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
AP1S1P61966 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.66□□□□□ -1.82
AP1S1P61966 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S1P61966 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S1P61966 AC100871.1-201ENST00000507871 1456 ntBASIC3.66□□□□□ -1.82
AP1S1P61966 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S1P61966 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
AP1S1P61966 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
AP1S1P61966 SNORD9-201ENST00000362566 104 ntBASIC3.65□□□□□ -1.83
AP1S1P61966 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.65□□□□□ -1.83
AP1S1P61966 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.65□□□□□ -1.83
AP1S1P61966 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
AP1S1P61966 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.65□□□□□ -1.83
AP1S1P61966 AC073387.1-201ENST00000453261 709 ntBASIC3.65□□□□□ -1.83
AP1S1P61966 AC005229.2-201ENST00000456995 399 ntBASIC3.65□□□□□ -1.83
AP1S1P61966 SNORA84-201ENST00000459229 133 ntBASIC3.65□□□□□ -1.83
AP1S1P61966 AP002812.1-201ENST00000495378 474 ntBASIC3.65□□□□□ -1.83
AP1S1P61966 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.65□□□□□ -1.83
AP1S1P61966 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.65□□□□□ -1.83
AP1S1P61966 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.65□□□□□ -1.83
AP1S1P61966 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.65□□□□□ -1.83
AP1S1P61966 SMARCE1P4-201ENST00000523647 241 ntBASIC3.65□□□□□ -1.83
AP1S1P61966 MIR4458-201ENST00000578872 75 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms