Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC2.73□□□□□ -1.97
CKS1BP61024 AC022336.1-201ENST00000475510 337 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 RPL35P6-201ENST00000490024 372 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 AL139099.1-201ENST00000497398 403 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 RPL23AP55-201ENST00000498163 452 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC2.73□□□□□ -1.97
CKS1BP61024 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC2.73□□□□□ -1.97
CKS1BP61024 AC110792.2-201ENST00000510278 224 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 SEC11B-201ENST00000518383 499 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.73□□□□□ -1.97
CKS1BP61024 AC105233.3-201ENST00000531125 744 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 OR8L1P-201ENST00000534005 955 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC2.73□□□□□ -1.97
CKS1BP61024 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.73□□□□□ -1.97
CKS1BP61024 AC025627.2-201ENST00000576220 160 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CKS1BP61024 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.73□□□□□ -1.97
CKS1BP61024 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC2.73□□□□□ -1.97
CKS1BP61024 AC006557.5-201ENST00000603126 811 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 AC115286.1-201ENST00000604298 434 ntBASIC2.73□□□□□ -1.97
CKS1BP61024 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CKS1BP61024 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CKS1BP61024 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CKS1BP61024 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CKS1BP61024 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC2.73□□□□□ -1.97
CKS1BP61024 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CKS1BP61024 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CKS1BP61024 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.73□□□□□ -1.97
CKS1BP61024 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.73□□□□□ -1.97
CKS1BP61024 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CKS1BP61024 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CKS1BP61024 AL158163.1-201ENST00000603915 1649 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CKS1BP61024 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.72□□□□□ -1.97
CKS1BP61024 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.72□□□□□ -1.97
CKS1BP61024 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CKS1BP61024 RNA5SP87-201ENST00000384155 118 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 SNORA37-201ENST00000384504 129 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 AL031121.1-201ENST00000406553 254 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 RN7SKP123-201ENST00000410732 291 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 SNORA57.3-201ENST00000411095 141 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 RPL7AP73-201ENST00000413490 353 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CKS1BP61024 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC2.72□□□□□ -1.97
CKS1BP61024 AL139095.3-201ENST00000419672 1203 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC2.72□□□□□ -1.97
CKS1BP61024 ELOCP11-201ENST00000436690 332 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC2.72□□□□□ -1.97
CKS1BP61024 AL772161.1-201ENST00000439130 476 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 ELOCP16-201ENST00000444494 332 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC2.72□□□□□ -1.97
CKS1BP61024 FCF1P7-201ENST00000451185 558 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 MRPS31P2-201ENST00000451581 518 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 AC092691.2-201ENST00000461787 803 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 AC109327.1-201ENST00000471666 403 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 RPS26P21-201ENST00000475397 348 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 HMGN2P13-201ENST00000476476 274 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 RN7SL283P-201ENST00000489055 303 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 RPS23P1-201ENST00000491662 432 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 RPS4XP14-201ENST00000493072 781 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 AC093663.1-201ENST00000497190 394 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 ATG10-AS1-201ENST00000504846 648 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CKS1BP61024 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.72□□□□□ -1.97
CKS1BP61024 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.72□□□□□ -1.97
CKS1BP61024 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC2.72□□□□□ -1.97
CKS1BP61024 RNA5SP519-201ENST00000516480 119 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 RNU7-143P-201ENST00000516781 65 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.72□□□□□ -1.97
CKS1BP61024 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC2.72□□□□□ -1.97
CKS1BP61024 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC2.72□□□□□ -1.97
CKS1BP61024 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.72□□□□□ -1.97
CKS1BP61024 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.72□□□□□ -1.97
CKS1BP61024 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC2.72□□□□□ -1.97
CKS1BP61024 MTCO3P24-201ENST00000572729 782 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 AC022655.2-201ENST00000577280 318 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC2.72□□□□□ -1.97
CKS1BP61024 MIR4436B2-201ENST00000581415 91 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
CKS1BP61024 MIR4436B1-201ENST00000583272 91 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 AC090948.1-201ENST00000607464 549 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 AC211433.2-201ENST00000608433 387 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 Mico1.1-201ENST00000611698 204 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 IPO5-229ENST00000631030 192 ntTSL 5 BASIC2.72□□□□□ -1.97
CKS1BP61024 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC2.72□□□□□ -1.97
CKS1BP61024 AC119674.1-212ENST00000641155 993 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CKS1BP61024 MTCO1P8-201ENST00000416914 1523 ntBASIC2.72□□□□□ -1.97
CKS1BP61024 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CKS1BP61024 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC2.71□□□□□ -1.98
CKS1BP61024 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
CKS1BP61024 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CKS1BP61024 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.71□□□□□ -1.98
CKS1BP61024 RNU1-101P-201ENST00000391171 127 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 AC092642.1-201ENST00000392417 425 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 RPS3AP23-201ENST00000401762 784 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CKS1BP61024 RPS16P5-201ENST00000406501 404 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 RN7SKP182-201ENST00000410772 298 ntBASIC2.71□□□□□ -1.98
CKS1BP61024 RNU2-71P-201ENST00000411395 189 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms