Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RIPK4P57078 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RIPK4P57078 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RIPK4P57078 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
RIPK4P57078 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK4P57078 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RIPK4P57078 RNA5SP119-201ENST00000362715 117 ntBASIC4.69□□□□□ -1.66
RIPK4P57078 RNA5SP42-201ENST00000364278 115 ntBASIC4.69□□□□□ -1.66
RIPK4P57078 AC093578.1-201ENST00000415219 368 ntBASIC4.69□□□□□ -1.66
RIPK4P57078 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.69□□□□□ -1.66
RIPK4P57078 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RIPK4P57078 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.69□□□□□ -1.66
RIPK4P57078 RPL21P23-201ENST00000446654 460 ntBASIC4.69□□□□□ -1.66
RIPK4P57078 PDSS1P2-201ENST00000449397 678 ntBASIC4.69□□□□□ -1.66
RIPK4P57078 AC098583.1-201ENST00000480875 255 ntBASIC4.69□□□□□ -1.66
RIPK4P57078 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.69□□□□□ -1.66
RIPK4P57078 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.69□□□□□ -1.66
RIPK4P57078 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.69□□□□□ -1.66
RIPK4P57078 AC005798.1-201ENST00000513715 387 ntBASIC4.69□□□□□ -1.66
RIPK4P57078 RNU6-1231P-201ENST00000517185 103 ntBASIC4.69□□□□□ -1.66
RIPK4P57078 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.69□□□□□ -1.66
RIPK4P57078 AC008489.1-201ENST00000524271 483 ntBASIC4.69□□□□□ -1.66
RIPK4P57078 OR8I1P-201ENST00000529291 931 ntBASIC4.69□□□□□ -1.66
RIPK4P57078 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK4P57078 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK4P57078 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.69□□□□□ -1.66
RIPK4P57078 AC053481.3-201ENST00000577881 843 ntBASIC4.69□□□□□ -1.66
RIPK4P57078 MIR6075-201ENST00000620782 95 ntBASIC4.69□□□□□ -1.66
RIPK4P57078 AL357559.1-201ENST00000622228 274 ntBASIC4.69□□□□□ -1.66
RIPK4P57078 AL365440.1-201ENST00000436135 2167 ntBASIC4.68□□□□□ -1.66
RIPK4P57078 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK4P57078 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK4P57078 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK4P57078 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.68□□□□□ -1.66
RIPK4P57078 AC017079.2-201ENST00000416102 485 ntBASIC4.68□□□□□ -1.66
RIPK4P57078 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.68□□□□□ -1.66
RIPK4P57078 AC073063.1-201ENST00000434352 607 ntBASIC4.68□□□□□ -1.66
RIPK4P57078 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.68□□□□□ -1.66
RIPK4P57078 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.68□□□□□ -1.66
RIPK4P57078 RNU7-170P-201ENST00000459303 61 ntBASIC4.68□□□□□ -1.66
RIPK4P57078 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.68□□□□□ -1.66
RIPK4P57078 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.68□□□□□ -1.66
RIPK4P57078 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.68□□□□□ -1.66
RIPK4P57078 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.68□□□□□ -1.66
RIPK4P57078 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.68□□□□□ -1.66
RIPK4P57078 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.68□□□□□ -1.66
RIPK4P57078 AC067838.1-201ENST00000606064 577 ntBASIC4.68□□□□□ -1.66
RIPK4P57078 AC008121.2-201ENST00000614647 523 ntBASIC4.68□□□□□ -1.66
RIPK4P57078 AC016957.2-201ENST00000616998 848 ntBASIC4.68□□□□□ -1.66
RIPK4P57078 AL158062.1-201ENST00000619632 745 ntBASIC4.68□□□□□ -1.66
RIPK4P57078 AC243312.2-201ENST00000623340 601 ntBASIC4.68□□□□□ -1.66
RIPK4P57078 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK4P57078 AC244258.1-201ENST00000637553 1071 ntBASIC4.68□□□□□ -1.66
RIPK4P57078 AL392088.2-201ENST00000637607 285 ntBASIC4.68□□□□□ -1.66
RIPK4P57078 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.68□□□□□ -1.66
RIPK4P57078 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK4P57078 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK4P57078 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK4P57078 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK4P57078 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK4P57078 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RIPK4P57078 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RIPK4P57078 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.67□□□□□ -1.66
RIPK4P57078 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RIPK4P57078 RNU6-697P-201ENST00000363348 107 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RIPK4P57078 MIR218-2-201ENST00000385006 110 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 CRYBB2P1-203ENST00000415709 538 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.67□□□□□ -1.66
RIPK4P57078 RPS26P47-201ENST00000427219 348 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 TPTE2P1-204ENST00000435256 593 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 SKP1P1-201ENST00000438081 489 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 RPL6P5-201ENST00000445678 828 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 AL358232.1-201ENST00000448030 501 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 RPL21P71-201ENST00000465598 459 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 AC084357.1-201ENST00000473404 255 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 AC068305.1-201ENST00000497406 726 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RIPK4P57078 SLC25A15P5-201ENST00000508033 253 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 AC110768.1-201ENST00000509222 400 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.67□□□□□ -1.66
RIPK4P57078 RNU6-579P-201ENST00000516879 102 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.67□□□□□ -1.66
RIPK4P57078 SOD1P3-201ENST00000518682 454 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.67□□□□□ -1.66
RIPK4P57078 AC103843.2-201ENST00000530523 682 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RIPK4P57078 AC007424.1-203ENST00000554613 687 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.67□□□□□ -1.66
RIPK4P57078 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.67□□□□□ -1.66
RIPK4P57078 AL109741.3-201ENST00000561748 592 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 AGGF1P8-201ENST00000562979 1000 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.67□□□□□ -1.66
RIPK4P57078 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.67□□□□□ -1.66
RIPK4P57078 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.67□□□□□ -1.66
RIPK4P57078 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.67□□□□□ -1.66
RIPK4P57078 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.67□□□□□ -1.66
RIPK4P57078 AL159169.2-201ENST00000610061 1269 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 uc_338.32-201ENST00000615087 172 ntBASIC4.67□□□□□ -1.66
RIPK4P57078 AC107905.1-201ENST00000616204 426 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms