Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SHMT2P34897 RNU6-603P-201ENST00000411403 107 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 NPM1P34-201ENST00000428821 893 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 RPS26P40-201ENST00000435209 294 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 RPL7P28-201ENST00000437739 740 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 AC092013.1-201ENST00000438795 332 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.81□□□□□ -1.8
SHMT2P34897 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.81□□□□□ -1.8
SHMT2P34897 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.81□□□□□ -1.8
SHMT2P34897 RPL7P48-201ENST00000461513 746 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 CABYRP1-201ENST00000465493 1045 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.81□□□□□ -1.8
SHMT2P34897 AC093663.2-201ENST00000484625 313 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 AC092045.1-201ENST00000495716 1231 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.81□□□□□ -1.8
SHMT2P34897 SNORA26.10-201ENST00000516427 141 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 IGHV3-32-201ENST00000519182 355 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.81□□□□□ -1.8
SHMT2P34897 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.81□□□□□ -1.8
SHMT2P34897 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.81□□□□□ -1.8
SHMT2P34897 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.81□□□□□ -1.8
SHMT2P34897 AC004775.1-201ENST00000607389 753 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.81□□□□□ -1.8
SHMT2P34897 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.81□□□□□ -1.8
SHMT2P34897 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.81□□□□□ -1.8
SHMT2P34897 CDRT1-208ENST00000630868 794 ntBASIC3.81□□□□□ -1.8
SHMT2P34897 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHMT2P34897 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHMT2P34897 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.81□□□□□ -1.8
SHMT2P34897 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
SHMT2P34897 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SHMT2P34897 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SHMT2P34897 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.8□□□□□ -1.8
SHMT2P34897 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.8□□□□□ -1.8
SHMT2P34897 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHMT2P34897 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHMT2P34897 HSPA8P1-201ENST00000425843 1833 ntBASIC3.8□□□□□ -1.8
SHMT2P34897 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.8□□□□□ -1.8
SHMT2P34897 SNORA62.2-201ENST00000364672 152 ntBASIC3.8□□□□□ -1.8
SHMT2P34897 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.8□□□□□ -1.8
SHMT2P34897 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.8□□□□□ -1.8
SHMT2P34897 RNU6-213P-201ENST00000384051 104 ntBASIC3.8□□□□□ -1.8
SHMT2P34897 HMGN2P8-201ENST00000391458 268 ntBASIC3.8□□□□□ -1.8
SHMT2P34897 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SHMT2P34897 AL353692.2-201ENST00000407054 335 ntBASIC3.8□□□□□ -1.8
SHMT2P34897 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.8□□□□□ -1.8
SHMT2P34897 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.8□□□□□ -1.8
SHMT2P34897 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.8□□□□□ -1.8
SHMT2P34897 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.8□□□□□ -1.8
SHMT2P34897 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.8□□□□□ -1.8
SHMT2P34897 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.8□□□□□ -1.8
SHMT2P34897 RN7SL93P-201ENST00000463035 293 ntBASIC3.8□□□□□ -1.8
SHMT2P34897 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.8□□□□□ -1.8
SHMT2P34897 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SHMT2P34897 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.8□□□□□ -1.8
SHMT2P34897 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.8□□□□□ -1.8
SHMT2P34897 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.8□□□□□ -1.8
SHMT2P34897 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.8□□□□□ -1.8
SHMT2P34897 NDUFA5P2-201ENST00000519723 344 ntBASIC3.8□□□□□ -1.8
SHMT2P34897 AC087369.1-201ENST00000520775 996 ntBASIC3.8□□□□□ -1.8
SHMT2P34897 OR4A12P-201ENST00000530847 918 ntBASIC3.8□□□□□ -1.8
SHMT2P34897 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.8□□□□□ -1.8
SHMT2P34897 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.8□□□□□ -1.8
SHMT2P34897 RN7SL703P-201ENST00000578485 302 ntBASIC3.8□□□□□ -1.8
SHMT2P34897 MIR548Y-201ENST00000582739 110 ntBASIC3.8□□□□□ -1.8
SHMT2P34897 uc_338.32-201ENST00000615087 172 ntBASIC3.8□□□□□ -1.8
SHMT2P34897 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.8□□□□□ -1.8
SHMT2P34897 HPVC1-201ENST00000629899 1198 ntBASIC3.8□□□□□ -1.8
SHMT2P34897 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.8□□□□□ -1.8
SHMT2P34897 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SHMT2P34897 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.8□□□□□ -1.8
SHMT2P34897 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.8□□□□□ -1.8
SHMT2P34897 MAPK10-373ENST00000641983 6772 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AC007529.1-201ENST00000418574 2178 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.79□□□□□ -1.8
SHMT2P34897 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SHMT2P34897 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.79□□□□□ -1.8
SHMT2P34897 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHMT2P34897 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
SHMT2P34897 RN7SKP280-201ENST00000364196 304 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AL445189.1-201ENST00000405722 338 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 ZNF602P-201ENST00000405929 924 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 Z98941.1-201ENST00000407764 100 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.79□□□□□ -1.8
SHMT2P34897 RPL17P36-201ENST00000420302 549 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 FAR1P1-201ENST00000427163 934 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 ATP5HP2-201ENST00000433885 485 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AC096638.2-201ENST00000434965 711 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.79□□□□□ -1.8
SHMT2P34897 RANP8-201ENST00000444720 713 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.79□□□□□ -1.8
SHMT2P34897 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.79□□□□□ -1.8
SHMT2P34897 AC239809.1-201ENST00000450470 217 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 OR9M1P-201ENST00000459641 921 ntBASIC3.79□□□□□ -1.8
SHMT2P34897 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.79□□□□□ -1.8
SHMT2P34897 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.79□□□□□ -1.8
SHMT2P34897 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.79□□□□□ -1.8
SHMT2P34897 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.79□□□□□ -1.8
SHMT2P34897 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms