Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DMBP28068 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DMBP28068 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DMBP28068 HMGN2P7-201ENST00000456186 273 ntBASIC2.91□□□□□ -1.94
HLA-DMBP28068 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DMBP28068 CEACAMP4-201ENST00000457676 421 ntBASIC2.91□□□□□ -1.94
HLA-DMBP28068 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DMBP28068 VN1R105P-201ENST00000486595 910 ntBASIC2.91□□□□□ -1.94
HLA-DMBP28068 TPT1P3-201ENST00000492841 512 ntBASIC2.91□□□□□ -1.94
HLA-DMBP28068 TRAV31-201ENST00000502780 342 ntBASIC2.91□□□□□ -1.94
HLA-DMBP28068 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DMBP28068 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DMBP28068 FTH1P21-201ENST00000512179 511 ntBASIC2.91□□□□□ -1.94
HLA-DMBP28068 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DMBP28068 HMGB1P23-201ENST00000518743 568 ntBASIC2.91□□□□□ -1.94
HLA-DMBP28068 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DMBP28068 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC2.91□□□□□ -1.94
HLA-DMBP28068 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DMBP28068 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.91□□□□□ -1.94
HLA-DMBP28068 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.91□□□□□ -1.94
HLA-DMBP28068 AC120057.2-201ENST00000571520 271 ntBASIC2.91□□□□□ -1.94
HLA-DMBP28068 MTCO2P22-201ENST00000603246 681 ntBASIC2.91□□□□□ -1.94
HLA-DMBP28068 AL049844.2-201ENST00000604280 628 ntBASIC2.91□□□□□ -1.94
HLA-DMBP28068 AL390816.3-201ENST00000604527 1066 ntBASIC2.91□□□□□ -1.94
HLA-DMBP28068 AL592436.1-201ENST00000605135 558 ntBASIC2.91□□□□□ -1.94
HLA-DMBP28068 AC079684.1-201ENST00000621405 437 ntBASIC2.91□□□□□ -1.94
HLA-DMBP28068 AP003072.4-201ENST00000624580 310 ntBASIC2.91□□□□□ -1.94
HLA-DMBP28068 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HLA-DMBP28068 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DMBP28068 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DMBP28068 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DMBP28068 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DMBP28068 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DMBP28068 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HLA-DMBP28068 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.91□□□□□ -1.94
HLA-DMBP28068 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HLA-DMBP28068 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HLA-DMBP28068 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
HLA-DMBP28068 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.94
HLA-DMBP28068 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC2.9□□□□□ -1.94
HLA-DMBP28068 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DMBP28068 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 U1.1-201ENST00000384101 164 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 RNU6-532P-201ENST00000384318 107 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 RN7SKP202-201ENST00000410439 330 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 Z97055.1-201ENST00000419730 712 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 ARF4P2-201ENST00000430209 526 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 RPS29P7-201ENST00000439662 171 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 MTCO3P16-201ENST00000454456 754 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 RAC1P2-201ENST00000511164 579 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 NDUFA5P2-201ENST00000519723 344 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 AC022695.1-201ENST00000522089 237 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DMBP28068 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 MIR4458-201ENST00000578872 75 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 AC005255.1-201ENST00000593748 216 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 AC243654.2-201ENST00000612843 443 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 AC139769.3-201ENST00000618383 175 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 MIR6500-201ENST00000622700 86 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 AC119674.1-212ENST00000641155 993 ntBASIC2.9□□□□□ -1.95
HLA-DMBP28068 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DMBP28068 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DMBP28068 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DMBP28068 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DMBP28068 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DMBP28068 AC096656.1-201ENST00000623826 1364 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DMBP28068 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DMBP28068 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DMBP28068 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 MIR134-201ENST00000385258 73 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 PTMAP5-201ENST00000393073 333 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 AC013404.1-201ENST00000413068 249 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 RPL36AP36-201ENST00000418616 301 ntBASIC2.89□□□□□ -1.95
HLA-DMBP28068 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DMBP28068 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DMBP28068 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms