Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 OR5BR1P-201ENST00000524992 1330 ntBASIC6.42□□□□□ -1.38
LMNB1P20700 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LMNB1P20700 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.42□□□□□ -1.38
LMNB1P20700 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
LMNB1P20700 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.42□□□□□ -1.38
LMNB1P20700 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.41□□□□□ -1.38
LMNB1P20700 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LMNB1P20700 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
LMNB1P20700 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LMNB1P20700 AC046144.1-201ENST00000478559 1853 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LMNB1P20700 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
LMNB1P20700 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.41□□□□□ -1.38
LMNB1P20700 AL121886.1-201ENST00000358609 435 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 RNA5SP479-201ENST00000364858 117 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.41□□□□□ -1.38
LMNB1P20700 RNU6-723P-201ENST00000383973 107 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
LMNB1P20700 RNA5SP332-201ENST00000391063 115 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 AL049693.1-201ENST00000402760 611 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 HMGN1P14-201ENST00000412459 517 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 USP9YP6-201ENST00000413550 854 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.41□□□□□ -1.38
LMNB1P20700 FCF1P2-201ENST00000415284 583 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.41□□□□□ -1.38
LMNB1P20700 AL389915.1-201ENST00000422463 466 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.41□□□□□ -1.38
LMNB1P20700 RPS27AP6-201ENST00000427962 448 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 AC244505.5-201ENST00000443639 207 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LMNB1P20700 NPM1P39-201ENST00000449818 867 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 USP9YP34-201ENST00000453983 808 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC6.41□□□□□ -1.38
LMNB1P20700 SNORD42A-201ENST00000459584 64 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 AC058823.1-201ENST00000485315 474 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 RN7SL244P-201ENST00000493405 297 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 MTCYBP17-201ENST00000503579 789 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.41□□□□□ -1.38
LMNB1P20700 SNORA48.10-201ENST00000516965 160 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 AC239860.2-201ENST00000525886 270 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 AC009643.1-201ENST00000532030 391 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 AL121579.1-201ENST00000555129 305 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.41□□□□□ -1.38
LMNB1P20700 BNIP3P5-201ENST00000562290 498 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 AC090751.1-201ENST00000566966 267 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.41□□□□□ -1.38
LMNB1P20700 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.41□□□□□ -1.38
LMNB1P20700 RN7SL356P-201ENST00000582228 248 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 AL022154.1-201ENST00000604698 785 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 AC069304.2-201ENST00000605154 435 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 AL353621.2-201ENST00000605340 133 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 CR381653.2-201ENST00000624041 768 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.41□□□□□ -1.38
LMNB1P20700 AL031985.3-201ENST00000565390 2449 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
LMNB1P20700 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
LMNB1P20700 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LMNB1P20700 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LMNB1P20700 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LMNB1P20700 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LMNB1P20700 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.41□□□□□ -1.38
LMNB1P20700 AC114774.1-201ENST00000507410 1770 ntBASIC6.41□□□□□ -1.38
LMNB1P20700 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LMNB1P20700 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LMNB1P20700 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.4□□□□□ -1.38
LMNB1P20700 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LMNB1P20700 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
LMNB1P20700 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
LMNB1P20700 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LMNB1P20700 ASNSP1-204ENST00000641977 1664 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.4□□□□□ -1.38
LMNB1P20700 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LMNB1P20700 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
LMNB1P20700 AC093849.1-201ENST00000563631 2209 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
LMNB1P20700 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.4□□□□□ -1.38
LMNB1P20700 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
LMNB1P20700 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
LMNB1P20700 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
LMNB1P20700 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC6.4□□□□□ -1.38
LMNB1P20700 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 RNU6-729P-201ENST00000384399 107 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 MIR137-201ENST00000385223 102 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
LMNB1P20700 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.4□□□□□ -1.38
LMNB1P20700 RN7SKP17-201ENST00000411242 351 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 RNU2-6P-201ENST00000411404 190 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.4□□□□□ -1.38
LMNB1P20700 AC092634.6-201ENST00000418558 192 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 AL121878.1-201ENST00000418638 859 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 AC069213.2-201ENST00000420238 366 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.4□□□□□ -1.38
LMNB1P20700 MTND3P21-201ENST00000433774 331 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 RPL34P20-201ENST00000442771 351 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.4□□□□□ -1.38
LMNB1P20700 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.4□□□□□ -1.38
LMNB1P20700 IMPA1P1-201ENST00000510718 842 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 MTCO1P30-201ENST00000515244 580 ntBASIC6.4□□□□□ -1.38
LMNB1P20700 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.4□□□□□ -1.38
LMNB1P20700 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms