Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.98□□□□□ -1.77
XRCC1P18887 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.98□□□□□ -1.77
XRCC1P18887 AC074367.1-201ENST00000438685 1125 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.98□□□□□ -1.77
XRCC1P18887 RPL23AP73-201ENST00000492507 471 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.98□□□□□ -1.77
XRCC1P18887 MTND3P24-201ENST00000506306 329 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 AC025768.1-201ENST00000510057 267 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 AC010342.1-201ENST00000514047 877 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
XRCC1P18887 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.98□□□□□ -1.77
XRCC1P18887 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.98□□□□□ -1.77
XRCC1P18887 AC110743.1-201ENST00000584870 478 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.98□□□□□ -1.77
XRCC1P18887 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.98□□□□□ -1.77
XRCC1P18887 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.98□□□□□ -1.77
XRCC1P18887 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.98□□□□□ -1.77
XRCC1P18887 AP003392.5-201ENST00000607857 415 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 AC245389.2-201ENST00000616023 576 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 AC242843.1-201ENST00000618702 573 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
XRCC1P18887 AL356094.1-201ENST00000624663 1212 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.98□□□□□ -1.77
XRCC1P18887 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
XRCC1P18887 LINC02471-203ENST00000641941 4752 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
XRCC1P18887 MTND5P11-201ENST00000511037 1812 ntBASIC3.98□□□□□ -1.77
XRCC1P18887 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.97□□□□□ -1.77
XRCC1P18887 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
XRCC1P18887 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
XRCC1P18887 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
XRCC1P18887 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
XRCC1P18887 Z82217.1-201ENST00000625157 8149 ntBASIC3.97□□□□□ -1.77
XRCC1P18887 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
XRCC1P18887 RNU1-64P-201ENST00000365443 163 ntBASIC3.97□□□□□ -1.77
XRCC1P18887 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.97□□□□□ -1.77
XRCC1P18887 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.97□□□□□ -1.77
XRCC1P18887 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.97□□□□□ -1.77
XRCC1P18887 OR8F1P-201ENST00000425243 930 ntBASIC3.97□□□□□ -1.77
XRCC1P18887 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.97□□□□□ -1.77
XRCC1P18887 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.97□□□□□ -1.77
XRCC1P18887 AL358472.1-201ENST00000431295 329 ntBASIC3.97□□□□□ -1.77
XRCC1P18887 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.97□□□□□ -1.77
XRCC1P18887 RPS4XP4-201ENST00000443195 763 ntBASIC3.97□□□□□ -1.77
XRCC1P18887 MTCYBP21-201ENST00000443300 1113 ntBASIC3.97□□□□□ -1.77
XRCC1P18887 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.97□□□□□ -1.77
XRCC1P18887 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
XRCC1P18887 RPL29P14-201ENST00000495837 428 ntBASIC3.97□□□□□ -1.77
XRCC1P18887 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.97□□□□□ -1.77
XRCC1P18887 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
XRCC1P18887 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.97□□□□□ -1.77
XRCC1P18887 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.97□□□□□ -1.77
XRCC1P18887 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.97□□□□□ -1.77
XRCC1P18887 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.97□□□□□ -1.77
XRCC1P18887 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.97□□□□□ -1.77
XRCC1P18887 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.97□□□□□ -1.77
XRCC1P18887 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.97□□□□□ -1.77
XRCC1P18887 AC079171.1-201ENST00000568788 914 ntBASIC3.97□□□□□ -1.77
XRCC1P18887 AC141257.3-201ENST00000572906 215 ntBASIC3.97□□□□□ -1.77
XRCC1P18887 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.97□□□□□ -1.77
XRCC1P18887 AC012417.1-201ENST00000582307 1039 ntBASIC3.97□□□□□ -1.77
XRCC1P18887 MIR5684-201ENST00000585074 65 ntBASIC3.97□□□□□ -1.77
XRCC1P18887 AC015911.5-201ENST00000587076 451 ntBASIC3.97□□□□□ -1.77
XRCC1P18887 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.97□□□□□ -1.77
XRCC1P18887 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.97□□□□□ -1.77
XRCC1P18887 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.97□□□□□ -1.77
XRCC1P18887 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
XRCC1P18887 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
XRCC1P18887 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
XRCC1P18887 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
XRCC1P18887 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
XRCC1P18887 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
XRCC1P18887 RNF6P1-201ENST00000444889 1784 ntBASIC3.97□□□□□ -1.77
XRCC1P18887 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
XRCC1P18887 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.96□□□□□ -1.77
XRCC1P18887 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
XRCC1P18887 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
XRCC1P18887 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
XRCC1P18887 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
XRCC1P18887 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
XRCC1P18887 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.96□□□□□ -1.78
XRCC1P18887 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
XRCC1P18887 RNA5SP239-201ENST00000410218 129 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 PGBD4P8-201ENST00000412993 562 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.96□□□□□ -1.78
XRCC1P18887 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
XRCC1P18887 VN1R25P-201ENST00000443385 738 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 AC069540.1-201ENST00000446320 988 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 MTND2P8-201ENST00000450555 1025 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 VN1R40P-201ENST00000455196 941 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.96□□□□□ -1.78
XRCC1P18887 BTF3L4P4-201ENST00000506381 449 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
XRCC1P18887 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
XRCC1P18887 FTH1P21-201ENST00000512179 511 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.96□□□□□ -1.78
XRCC1P18887 RNU7-143P-201ENST00000516781 65 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.96□□□□□ -1.78
XRCC1P18887 IGHV3-32-201ENST00000519182 355 ntBASIC3.96□□□□□ -1.78
XRCC1P18887 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms