Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SDC1P18827 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SDC1P18827 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SDC1P18827 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SDC1P18827 RNU1-89P-201ENST00000384592 164 ntBASIC3.76□□□□□ -1.81
SDC1P18827 ENSAP1-201ENST00000392855 326 ntBASIC3.76□□□□□ -1.81
SDC1P18827 MIR937-201ENST00000401271 86 ntBASIC3.76□□□□□ -1.81
SDC1P18827 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.76□□□□□ -1.81
SDC1P18827 AC016397.1-201ENST00000412463 242 ntBASIC3.76□□□□□ -1.81
SDC1P18827 OR8G2P-201ENST00000412796 908 ntBASIC3.76□□□□□ -1.81
SDC1P18827 AC234782.4-201ENST00000417646 1048 ntBASIC3.76□□□□□ -1.81
SDC1P18827 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.76□□□□□ -1.81
SDC1P18827 AC234779.1-201ENST00000425910 285 ntBASIC3.76□□□□□ -1.81
SDC1P18827 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.76□□□□□ -1.81
SDC1P18827 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.76□□□□□ -1.81
SDC1P18827 MRPL50P1-201ENST00000431951 384 ntBASIC3.76□□□□□ -1.81
SDC1P18827 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.76□□□□□ -1.81
SDC1P18827 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.76□□□□□ -1.81
SDC1P18827 AC006994.1-201ENST00000438212 839 ntBASIC3.76□□□□□ -1.81
SDC1P18827 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.76□□□□□ -1.81
SDC1P18827 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.76□□□□□ -1.81
SDC1P18827 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.76□□□□□ -1.81
SDC1P18827 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.76□□□□□ -1.81
SDC1P18827 AL035407.2-201ENST00000454090 378 ntBASIC3.76□□□□□ -1.81
SDC1P18827 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
SDC1P18827 BTF3L4P4-201ENST00000506381 449 ntBASIC3.76□□□□□ -1.81
SDC1P18827 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.76□□□□□ -1.81
SDC1P18827 AC034205.1-201ENST00000520621 638 ntBASIC3.76□□□□□ -1.81
SDC1P18827 AC087369.1-201ENST00000520775 996 ntBASIC3.76□□□□□ -1.81
SDC1P18827 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.76□□□□□ -1.81
SDC1P18827 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.76□□□□□ -1.81
SDC1P18827 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.76□□□□□ -1.81
SDC1P18827 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.76□□□□□ -1.81
SDC1P18827 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.76□□□□□ -1.81
SDC1P18827 AP003717.3-201ENST00000544832 1180 ntBASIC3.76□□□□□ -1.81
SDC1P18827 CR383656.6-201ENST00000550518 394 ntBASIC3.76□□□□□ -1.81
SDC1P18827 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.76□□□□□ -1.81
SDC1P18827 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.76□□□□□ -1.81
SDC1P18827 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.76□□□□□ -1.81
SDC1P18827 AC027104.1-201ENST00000563702 681 ntBASIC3.76□□□□□ -1.81
SDC1P18827 AC090751.1-201ENST00000566966 267 ntBASIC3.76□□□□□ -1.81
SDC1P18827 AC124283.4-201ENST00000581815 456 ntBASIC3.76□□□□□ -1.81
SDC1P18827 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.76□□□□□ -1.81
SDC1P18827 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.76□□□□□ -1.81
SDC1P18827 AC125494.3-201ENST00000602759 455 ntBASIC3.76□□□□□ -1.81
SDC1P18827 MTATP6P2-201ENST00000603319 678 ntBASIC3.76□□□□□ -1.81
SDC1P18827 AC021851.1-201ENST00000608537 1082 ntBASIC3.76□□□□□ -1.81
SDC1P18827 AC096586.1-201ENST00000610267 561 ntBASIC3.76□□□□□ -1.81
SDC1P18827 MIR6820-201ENST00000611508 62 ntBASIC3.76□□□□□ -1.81
SDC1P18827 AC024595.1-201ENST00000623088 387 ntBASIC3.76□□□□□ -1.81
SDC1P18827 AL359715.5-201ENST00000623431 443 ntBASIC3.76□□□□□ -1.81
SDC1P18827 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.76□□□□□ -1.81
SDC1P18827 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.76□□□□□ -1.81
SDC1P18827 AC073429.2-201ENST00000569694 1444 ntBASIC3.76□□□□□ -1.81
SDC1P18827 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.76□□□□□ -1.81
SDC1P18827 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SDC1P18827 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SDC1P18827 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.75□□□□□ -1.81
SDC1P18827 AL118496.1-201ENST00000440201 1812 ntBASIC3.75□□□□□ -1.81
SDC1P18827 AC100871.1-201ENST00000507871 1456 ntBASIC3.75□□□□□ -1.81
SDC1P18827 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.75□□□□□ -1.81
SDC1P18827 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SDC1P18827 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.75□□□□□ -1.81
SDC1P18827 RNA5SP322-201ENST00000363617 119 ntBASIC3.75□□□□□ -1.81
SDC1P18827 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.75□□□□□ -1.81
SDC1P18827 AC115285.1-201ENST00000424879 736 ntBASIC3.75□□□□□ -1.81
SDC1P18827 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.75□□□□□ -1.81
SDC1P18827 FO393414.1-201ENST00000428697 1184 ntBASIC3.75□□□□□ -1.81
SDC1P18827 TBCAP1-201ENST00000436520 327 ntBASIC3.75□□□□□ -1.81
SDC1P18827 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SDC1P18827 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.75□□□□□ -1.81
SDC1P18827 RANP8-201ENST00000444720 713 ntBASIC3.75□□□□□ -1.81
SDC1P18827 RPL6P5-201ENST00000445678 828 ntBASIC3.75□□□□□ -1.81
SDC1P18827 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.75□□□□□ -1.81
SDC1P18827 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.75□□□□□ -1.81
SDC1P18827 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.75□□□□□ -1.81
SDC1P18827 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.75□□□□□ -1.81
SDC1P18827 CDH12P4-201ENST00000517835 295 ntBASIC3.75□□□□□ -1.81
SDC1P18827 CDH12P3-201ENST00000517935 295 ntBASIC3.75□□□□□ -1.81
SDC1P18827 CDH12P1-201ENST00000518435 295 ntBASIC3.75□□□□□ -1.81
SDC1P18827 AC090819.1-201ENST00000523800 1111 ntBASIC3.75□□□□□ -1.81
SDC1P18827 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SDC1P18827 YPEL5P3-201ENST00000547227 352 ntBASIC3.75□□□□□ -1.81
SDC1P18827 AC091516.1-201ENST00000549191 703 ntBASIC3.75□□□□□ -1.81
SDC1P18827 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.75□□□□□ -1.81
SDC1P18827 AC084757.1-201ENST00000559987 490 ntBASIC3.75□□□□□ -1.81
SDC1P18827 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.75□□□□□ -1.81
SDC1P18827 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.75□□□□□ -1.81
SDC1P18827 MIR4716-201ENST00000579628 84 ntBASIC3.75□□□□□ -1.81
SDC1P18827 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.75□□□□□ -1.81
SDC1P18827 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.75□□□□□ -1.81
SDC1P18827 AC011477.5-201ENST00000586571 259 ntBASIC3.75□□□□□ -1.81
SDC1P18827 PCNAP1-202ENST00000595299 752 ntBASIC3.75□□□□□ -1.81
SDC1P18827 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.75□□□□□ -1.81
SDC1P18827 AC104785.1-201ENST00000603220 588 ntBASIC3.75□□□□□ -1.81
SDC1P18827 ABI1P1-201ENST00000603375 1120 ntBASIC3.75□□□□□ -1.81
SDC1P18827 HMGB1P50-201ENST00000605814 607 ntBASIC3.75□□□□□ -1.81
SDC1P18827 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.75□□□□□ -1.81
SDC1P18827 AL031985.3-201ENST00000565390 2449 ntBASIC3.75□□□□□ -1.81
SDC1P18827 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms