Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.41□□□□□ -1.54
COL6A2P12110 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.41□□□□□ -1.54
COL6A2P12110 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.41□□□□□ -1.54
COL6A2P12110 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.41□□□□□ -1.54
COL6A2P12110 AL121579.1-201ENST00000555129 305 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 SULT1C2P1-202ENST00000562418 459 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 MIR3913-1-201ENST00000577744 102 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 MTCYBP13-201ENST00000578634 1093 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.41□□□□□ -1.54
COL6A2P12110 MIR4307-201ENST00000582802 84 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.41□□□□□ -1.54
COL6A2P12110 AL133338.2-201ENST00000604292 736 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 AC097468.3-201ENST00000607956 456 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.41□□□□□ -1.54
COL6A2P12110 MIR3688-2-201ENST00000636963 87 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 FAM157B-203ENST00000639350 358 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 AC006378.2-201ENST00000623178 2476 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.41□□□□□ -1.54
COL6A2P12110 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.41□□□□□ -1.54
COL6A2P12110 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 AL034370.1-201ENST00000397254 1590 ntBASIC5.41□□□□□ -1.54
COL6A2P12110 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
COL6A2P12110 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL6A2P12110 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
COL6A2P12110 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL6A2P12110 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL6A2P12110 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.4□□□□□ -1.54
COL6A2P12110 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.4□□□□□ -1.54
COL6A2P12110 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
COL6A2P12110 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL6A2P12110 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
COL6A2P12110 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.4□□□□□ -1.54
COL6A2P12110 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
COL6A2P12110 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.4□□□□□ -1.54
COL6A2P12110 RNU1-19P-201ENST00000363306 165 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 RNU4-12P-201ENST00000365233 139 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 MTND4LP20-201ENST00000402379 270 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 FGF7P8-201ENST00000402994 292 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 MIR1305-201ENST00000408300 86 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.4□□□□□ -1.54
COL6A2P12110 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.4□□□□□ -1.54
COL6A2P12110 RN7SKP266-201ENST00000410232 287 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 RPS3AP3-201ENST00000411933 242 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AP000534.2-201ENST00000412729 568 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 COX5BP7-201ENST00000414780 274 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 CCDC58P2-201ENST00000417131 366 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 COX6CP17-201ENST00000421389 185 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.4□□□□□ -1.54
COL6A2P12110 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.4□□□□□ -1.54
COL6A2P12110 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.4□□□□□ -1.54
COL6A2P12110 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.4□□□□□ -1.54
COL6A2P12110 SNRPEP7-201ENST00000438350 220 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AC073614.1-201ENST00000438690 650 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 RABEPKP1-201ENST00000440529 1026 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AL450996.1-201ENST00000445574 1202 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AL450023.1-201ENST00000450868 751 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.4□□□□□ -1.54
COL6A2P12110 AL672167.3-201ENST00000465951 960 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AC108078.1-201ENST00000508073 725 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 PTGES3P3-201ENST00000511479 482 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 RNU6-202P-201ENST00000515998 96 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AC060775.1-201ENST00000518241 520 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.4□□□□□ -1.54
COL6A2P12110 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.4□□□□□ -1.54
COL6A2P12110 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.4□□□□□ -1.54
COL6A2P12110 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.4□□□□□ -1.54
COL6A2P12110 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.4□□□□□ -1.54
COL6A2P12110 AC040958.1-201ENST00000561102 201 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL6A2P12110 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.4□□□□□ -1.54
COL6A2P12110 AC137800.2-201ENST00000574375 120 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.4□□□□□ -1.54
COL6A2P12110 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.4□□□□□ -1.54
COL6A2P12110 BNIP3P23-201ENST00000599655 511 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL6A2P12110 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.4□□□□□ -1.54
COL6A2P12110 AC244107.2-201ENST00000611773 76 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AC008250.2-201ENST00000615261 205 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AL359314.1-201ENST00000616913 261 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AC109583.2-201ENST00000617367 129 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AL158209.2-201ENST00000619266 216 ntBASIC5.4□□□□□ -1.54
COL6A2P12110 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.4□□□□□ -1.54
COL6A2P12110 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.4□□□□□ -1.54
COL6A2P12110 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.55
COL6A2P12110 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL6A2P12110 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COL6A2P12110 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
COL6A2P12110 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL6A2P12110 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.4□□□□□ -1.55
COL6A2P12110 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COL6A2P12110 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.4□□□□□ -1.55
COL6A2P12110 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms