Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC011840.5-201ENST00000582125 771 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AC069307.1-201ENST00000602820 447 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AC009027.1-201ENST00000604510 479 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AL161729.4-201ENST00000604650 476 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AC109583.2-201ENST00000617367 129 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AC025125.1-201ENST00000624743 1922 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 AC114947.2-201ENST00000565748 2125 ntBASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CSB-PGBD3P0DP91 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 ZNF37BP-203ENST00000452306 1352 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AL031985.3-201ENST00000565390 2449 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 RNU6ATAC7P-201ENST00000408111 127 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 U3.36-201ENST00000408418 213 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 VN1R36P-201ENST00000414936 291 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AC233981.1-201ENST00000423224 461 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 OR4F13P-201ENST00000428478 931 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 GSTM5P1-201ENST00000434751 660 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 USP9YP15-201ENST00000442391 422 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 PDSS1P2-201ENST00000449397 678 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AL672138.1-201ENST00000450604 1015 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AP000797.1-201ENST00000478870 387 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AC096754.1-201ENST00000508904 818 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AC078899.1-201ENST00000521432 1185 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 OR4A12P-201ENST00000530847 918 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 ARL2BPP2-201ENST00000550907 489 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 CYCSP2-201ENST00000558168 301 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AP000648.2-201ENST00000624182 404 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AC231657.1-201ENST00000624313 397 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AP000550.3-201ENST00000637734 379 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 AC239868.2-201ENST00000564237 4527 ntBASIC7.35□□□□□ -1.23
CSB-PGBD3P0DP91 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AC005224.3-201ENST00000584683 2140 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 RNU5F-6P-201ENST00000362979 116 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 Y_RNA.142-201ENST00000363491 102 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 SRSF1P1-201ENST00000424058 520 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 MTCYBP6-201ENST00000441810 138 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 RPL39P6-201ENST00000448289 150 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 CBX1P2-201ENST00000453841 458 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AL445687.2-201ENST00000458156 728 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AC005912.1-201ENST00000495392 255 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 IGBP1P4-201ENST00000503202 879 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AC111000.3-201ENST00000508057 576 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 RNU6-202P-201ENST00000515998 96 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 RNU6-430P-201ENST00000517078 107 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AF235103.2-201ENST00000525753 346 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 OR4A45P-201ENST00000529954 901 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 HMGB1P33-201ENST00000563485 527 ntBASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.34□□□□□ -1.23
CSB-PGBD3P0DP91 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms