Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.76□□□□□ -1.65
MMP3P08254 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.76□□□□□ -1.65
MMP3P08254 AC091057.2-201ENST00000602594 792 ntBASIC4.76□□□□□ -1.65
MMP3P08254 AL583856.2-201ENST00000606298 543 ntBASIC4.76□□□□□ -1.65
MMP3P08254 AC024595.1-201ENST00000623088 387 ntBASIC4.76□□□□□ -1.65
MMP3P08254 AP003485.2-201ENST00000623636 610 ntBASIC4.76□□□□□ -1.65
MMP3P08254 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.76□□□□□ -1.65
MMP3P08254 AC017104.4-201ENST00000636283 1592 ntBASIC4.76□□□□□ -1.65
MMP3P08254 AC090897.3-201ENST00000636973 1157 ntBASIC4.76□□□□□ -1.65
MMP3P08254 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MMP3P08254 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
MMP3P08254 RLIMP1-201ENST00000339626 1680 ntBASIC4.76□□□□□ -1.65
MMP3P08254 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
MMP3P08254 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MMP3P08254 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MMP3P08254 SEC63P2-201ENST00000503863 1939 ntBASIC4.76□□□□□ -1.65
MMP3P08254 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
MMP3P08254 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
MMP3P08254 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.75□□□□□ -1.65
MMP3P08254 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.75□□□□□ -1.65
MMP3P08254 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
MMP3P08254 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MMP3P08254 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MMP3P08254 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MMP3P08254 AL592182.3-201ENST00000642132 3304 ntBASIC4.75□□□□□ -1.65
MMP3P08254 RNU4-51P-201ENST00000364206 140 ntBASIC4.75□□□□□ -1.65
MMP3P08254 RNA5SP513-201ENST00000364648 118 ntBASIC4.75□□□□□ -1.65
MMP3P08254 RNU4-28P-201ENST00000364739 141 ntBASIC4.75□□□□□ -1.65
MMP3P08254 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
MMP3P08254 AL136310.1-201ENST00000404926 654 ntBASIC4.75□□□□□ -1.65
MMP3P08254 MIR1303-201ENST00000408625 86 ntBASIC4.75□□□□□ -1.65
MMP3P08254 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.75□□□□□ -1.65
MMP3P08254 AC108032.1-201ENST00000416706 207 ntBASIC4.75□□□□□ -1.65
MMP3P08254 RPS24P7-201ENST00000416921 246 ntBASIC4.75□□□□□ -1.65
MMP3P08254 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.75□□□□□ -1.65
MMP3P08254 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.75□□□□□ -1.65
MMP3P08254 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.75□□□□□ -1.65
MMP3P08254 AL592437.1-201ENST00000443781 492 ntBASIC4.75□□□□□ -1.65
MMP3P08254 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.75□□□□□ -1.65
MMP3P08254 MTCYBP42-201ENST00000444653 1130 ntBASIC4.75□□□□□ -1.65
MMP3P08254 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.75□□□□□ -1.65
MMP3P08254 DNAJC19P8-201ENST00000452887 259 ntBASIC4.75□□□□□ -1.65
MMP3P08254 AC108751.2-201ENST00000469993 231 ntBASIC4.75□□□□□ -1.65
MMP3P08254 AC011037.1-201ENST00000483964 558 ntBASIC4.75□□□□□ -1.65
MMP3P08254 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.75□□□□□ -1.65
MMP3P08254 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.75□□□□□ -1.65
MMP3P08254 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.75□□□□□ -1.65
MMP3P08254 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.75□□□□□ -1.65
MMP3P08254 MTCO1P49-201ENST00000523429 802 ntBASIC4.75□□□□□ -1.65
MMP3P08254 DEFB130C-202ENST00000530001 230 ntBASIC4.75□□□□□ -1.65
MMP3P08254 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.75□□□□□ -1.65
MMP3P08254 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.75□□□□□ -1.65
MMP3P08254 MIR4286-201ENST00000580651 93 ntBASIC4.75□□□□□ -1.65
MMP3P08254 AC061975.8-201ENST00000587058 721 ntBASIC4.75□□□□□ -1.65
MMP3P08254 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.75□□□□□ -1.65
MMP3P08254 AC125494.3-201ENST00000602759 455 ntBASIC4.75□□□□□ -1.65
MMP3P08254 AL020997.3-201ENST00000602843 359 ntBASIC4.75□□□□□ -1.65
MMP3P08254 AL353778.1-201ENST00000603149 408 ntBASIC4.75□□□□□ -1.65
MMP3P08254 AC009948.4-201ENST00000604692 675 ntBASIC4.75□□□□□ -1.65
MMP3P08254 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.75□□□□□ -1.65
MMP3P08254 AC024257.5-201ENST00000612739 531 ntBASIC4.75□□□□□ -1.65
MMP3P08254 STMN1P1-201ENST00000617809 440 ntBASIC4.75□□□□□ -1.65
MMP3P08254 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.75□□□□□ -1.65
MMP3P08254 ZNF663P-202ENST00000641770 1131 ntBASIC4.75□□□□□ -1.65
MMP3P08254 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MMP3P08254 AC093311.1-201ENST00000506586 2021 ntBASIC4.75□□□□□ -1.65
MMP3P08254 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.75□□□□□ -1.65
MMP3P08254 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MMP3P08254 AC000374.1-201ENST00000434698 1745 ntBASIC4.75□□□□□ -1.65
MMP3P08254 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.74□□□□□ -1.65
MMP3P08254 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
MMP3P08254 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.74□□□□□ -1.65
MMP3P08254 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
MMP3P08254 ENSAP1-201ENST00000392855 326 ntBASIC4.74□□□□□ -1.65
MMP3P08254 MTCO1P56-201ENST00000401674 224 ntBASIC4.74□□□□□ -1.65
MMP3P08254 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.74□□□□□ -1.65
MMP3P08254 AL356320.2-201ENST00000417263 507 ntBASIC4.74□□□□□ -1.65
MMP3P08254 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.74□□□□□ -1.65
MMP3P08254 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.74□□□□□ -1.65
MMP3P08254 AL451062.2-201ENST00000427515 271 ntBASIC4.74□□□□□ -1.65
MMP3P08254 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.74□□□□□ -1.65
MMP3P08254 AC234064.1-201ENST00000436312 247 ntBASIC4.74□□□□□ -1.65
MMP3P08254 AL450263.2-201ENST00000439400 589 ntBASIC4.74□□□□□ -1.65
MMP3P08254 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.74□□□□□ -1.65
MMP3P08254 HMGB3P6-201ENST00000444896 598 ntBASIC4.74□□□□□ -1.65
MMP3P08254 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.74□□□□□ -1.65
MMP3P08254 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.74□□□□□ -1.65
MMP3P08254 AC112492.1-201ENST00000449607 712 ntBASIC4.74□□□□□ -1.65
MMP3P08254 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.74□□□□□ -1.65
MMP3P08254 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.74□□□□□ -1.65
MMP3P08254 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.74□□□□□ -1.65
MMP3P08254 PGBD4P4-201ENST00000509673 613 ntBASIC4.74□□□□□ -1.65
MMP3P08254 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.74□□□□□ -1.65
MMP3P08254 AC108471.1-201ENST00000513977 287 ntBASIC4.74□□□□□ -1.65
MMP3P08254 AC023632.4-201ENST00000517783 191 ntBASIC4.74□□□□□ -1.65
MMP3P08254 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.74□□□□□ -1.65
MMP3P08254 MTCO3P15-201ENST00000526563 574 ntBASIC4.74□□□□□ -1.65
MMP3P08254 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.74□□□□□ -1.65
MMP3P08254 DYNLL1P4-201ENST00000549314 266 ntBASIC4.74□□□□□ -1.65
MMP3P08254 MRPS36P5-201ENST00000551909 298 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms