Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL512782.1-201ENST00000603093 364 ntBASIC6.01□□□□□ -1.45
PDGFAP04085 AL022345.1-201ENST00000607292 135 ntBASIC6.01□□□□□ -1.45
PDGFAP04085 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.01□□□□□ -1.45
PDGFAP04085 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.01□□□□□ -1.45
PDGFAP04085 AL096712.1-201ENST00000614561 159 ntBASIC6.01□□□□□ -1.45
PDGFAP04085 AC074140.1-201ENST00000621617 208 ntBASIC6.01□□□□□ -1.45
PDGFAP04085 AC015871.5-202ENST00000623252 701 ntBASIC6.01□□□□□ -1.45
PDGFAP04085 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.01□□□□□ -1.45
PDGFAP04085 AP000550.3-201ENST00000637734 379 ntBASIC6.01□□□□□ -1.45
PDGFAP04085 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFAP04085 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
PDGFAP04085 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PDGFAP04085 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFAP04085 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFAP04085 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFAP04085 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.01□□□□□ -1.45
PDGFAP04085 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFAP04085 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFAP04085 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.01□□□□□ -1.45
PDGFAP04085 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFAP04085 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.01□□□□□ -1.45
PDGFAP04085 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFAP04085 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDGFAP04085 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFAP04085 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6□□□□□ -1.45
PDGFAP04085 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6□□□□□ -1.45
PDGFAP04085 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6□□□□□ -1.45
PDGFAP04085 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFAP04085 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFAP04085 AC140479.2-201ENST00000421567 3130 ntBASIC6□□□□□ -1.45
PDGFAP04085 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFAP04085 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFAP04085 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PDGFAP04085 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFAP04085 AC073343.1-201ENST00000328239 651 ntBASIC6□□□□□ -1.45
PDGFAP04085 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDGFAP04085 RNU5E-8P-201ENST00000363502 116 ntBASIC6□□□□□ -1.45
PDGFAP04085 RNU5A-8P-201ENST00000364102 114 ntBASIC6□□□□□ -1.45
PDGFAP04085 AL451054.2-201ENST00000420896 202 ntBASIC6□□□□□ -1.45
PDGFAP04085 CHIAP3-201ENST00000423668 1133 ntBASIC6□□□□□ -1.45
PDGFAP04085 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC6□□□□□ -1.45
PDGFAP04085 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6□□□□□ -1.45
PDGFAP04085 AC068228.1-201ENST00000461723 211 ntBASIC6□□□□□ -1.45
PDGFAP04085 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6□□□□□ -1.45
PDGFAP04085 RPL5P22-201ENST00000480199 884 ntBASIC6□□□□□ -1.45
PDGFAP04085 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6□□□□□ -1.45
PDGFAP04085 RN7SL101P-201ENST00000496350 279 ntBASIC6□□□□□ -1.45
PDGFAP04085 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
PDGFAP04085 OR4D12P-201ENST00000509361 911 ntBASIC6□□□□□ -1.45
PDGFAP04085 GAPDHP62-201ENST00000515313 990 ntBASIC6□□□□□ -1.45
PDGFAP04085 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6□□□□□ -1.45
PDGFAP04085 TRIM77BP-201ENST00000524985 1119 ntBASIC6□□□□□ -1.45
PDGFAP04085 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6□□□□□ -1.45
PDGFAP04085 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6□□□□□ -1.45
PDGFAP04085 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6□□□□□ -1.45
PDGFAP04085 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6□□□□□ -1.45
PDGFAP04085 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6□□□□□ -1.45
PDGFAP04085 AC007342.5-201ENST00000571340 2142 ntBASIC6□□□□□ -1.45
PDGFAP04085 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6□□□□□ -1.45
PDGFAP04085 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6□□□□□ -1.45
PDGFAP04085 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6□□□□□ -1.45
PDGFAP04085 RNU6-89P-201ENST00000606519 100 ntBASIC6□□□□□ -1.45
PDGFAP04085 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFAP04085 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFAP04085 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFAP04085 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6□□□□□ -1.45
PDGFAP04085 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFAP04085 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFAP04085 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PDGFAP04085 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PDGFAP04085 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
PDGFAP04085 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFAP04085 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PDGFAP04085 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFAP04085 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 AC027088.4-201ENST00000611559 1947 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFAP04085 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFAP04085 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFAP04085 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFAP04085 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFAP04085 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.99□□□□□ -1.45
PDGFAP04085 ELL2P4-201ENST00000446870 1376 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 LARP1BP1-201ENST00000506036 1359 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDGFAP04085 SNORA51.1-201ENST00000363243 140 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 RNU6-1243P-201ENST00000364028 107 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 MIR606-201ENST00000384851 96 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 MIR548P-201ENST00000408336 84 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 Y_RNA.615-201ENST00000410769 117 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 RPSAP35-201ENST00000413753 818 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 RPL6P29-201ENST00000414863 865 ntBASIC5.99□□□□□ -1.45
PDGFAP04085 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.99□□□□□ -1.45
PDGFAP04085 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.99□□□□□ -1.45
PDGFAP04085 RPS3P2-201ENST00000421346 701 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms