Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC020978.9-201ENST00000624380 1141 ntBASIC4.29□□□□□ -1.72
CHRNA1P02708 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.29□□□□□ -1.72
CHRNA1P02708 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.29□□□□□ -1.72
CHRNA1P02708 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.29□□□□□ -1.72
CHRNA1P02708 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA1P02708 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA1P02708 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CHRNA1P02708 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA1P02708 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA1P02708 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CHRNA1P02708 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA1P02708 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 RAD1P1-201ENST00000231383 813 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 SNORD115-48-201ENST00000364764 76 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.28□□□□□ -1.72
CHRNA1P02708 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.28□□□□□ -1.72
CHRNA1P02708 RNU6-40P-201ENST00000384254 107 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 RNU6-452P-201ENST00000384406 107 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CHRNA1P02708 SNORA11.1-201ENST00000408133 129 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 MTND2P15-201ENST00000418575 892 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 AC004552.1-201ENST00000419089 348 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA1P02708 AL139247.1-201ENST00000422768 325 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 MTCO1P54-201ENST00000430139 712 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA1P02708 AC083863.1-201ENST00000438811 231 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA1P02708 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.28□□□□□ -1.72
CHRNA1P02708 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
CHRNA1P02708 SNRPGP5-201ENST00000456003 220 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 RPS26P3-201ENST00000470205 348 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 AC010683.1-201ENST00000473673 378 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 AC090543.2-201ENST00000483963 348 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 AC011037.1-201ENST00000483964 558 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 AC004057.1-201ENST00000485827 348 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA1P02708 AC006499.5-201ENST00000505037 514 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA1P02708 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.28□□□□□ -1.72
CHRNA1P02708 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.28□□□□□ -1.72
CHRNA1P02708 NOP56P3-201ENST00000549457 385 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 CBX3P5-201ENST00000552017 521 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 AC005242.1-201ENST00000585658 438 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 VN1R79P-201ENST00000593540 513 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 VN1R84P-201ENST00000593697 235 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 AC083899.3-201ENST00000603413 594 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 AL049634.3-201ENST00000604968 457 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 AL391497.1-201ENST00000608671 547 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.28□□□□□ -1.72
CHRNA1P02708 AF001550.2-201ENST00000636643 217 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CHRNA1P02708 AC095050.2-201ENST00000510748 1458 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA1P02708 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA1P02708 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CHRNA1P02708 AL118496.1-201ENST00000440201 1812 ntBASIC4.28□□□□□ -1.72
CHRNA1P02708 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
CHRNA1P02708 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
CHRNA1P02708 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.27□□□□□ -1.73
CHRNA1P02708 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CHRNA1P02708 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHRNA1P02708 Y_RNA.333-201ENST00000365274 102 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 U3.15-201ENST00000365398 212 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 RNU6-761P-201ENST00000384148 107 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 SNORD3H-201ENST00000384486 214 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 MIR7-3-201ENST00000384898 110 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CHRNA1P02708 ZNF602P-201ENST00000405929 924 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 AC013404.1-201ENST00000413068 249 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.27□□□□□ -1.73
CHRNA1P02708 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.27□□□□□ -1.73
CHRNA1P02708 AC092647.1-201ENST00000420654 287 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 AL591419.1-201ENST00000427423 339 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 NPM1P24-201ENST00000428039 894 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 Z74696.2-201ENST00000436514 498 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 AL031663.1-201ENST00000437445 219 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 AL353748.1-201ENST00000440753 474 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.27□□□□□ -1.73
CHRNA1P02708 AL513343.1-201ENST00000451818 792 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 RPL21P11-201ENST00000461458 483 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 AL133162.1-201ENST00000463228 453 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 AC006517.1-201ENST00000480485 328 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 UBE2CP3-201ENST00000502715 450 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CHRNA1P02708 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.27□□□□□ -1.73
CHRNA1P02708 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.27□□□□□ -1.73
CHRNA1P02708 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.27□□□□□ -1.73
CHRNA1P02708 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.27□□□□□ -1.73
CHRNA1P02708 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.27□□□□□ -1.73
CHRNA1P02708 SUMO2P14-201ENST00000604488 293 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 AC012468.1-201ENST00000604888 430 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 uc_338.32-201ENST00000615087 172 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 AP004607.9-201ENST00000618202 316 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 AC124312.6-202ENST00000623624 418 ntBASIC4.27□□□□□ -1.73
CHRNA1P02708 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.27□□□□□ -1.73
CHRNA1P02708 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.27□□□□□ -1.73
CHRNA1P02708 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.27□□□□□ -1.73
CHRNA1P02708 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms