Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RN7SL703P-201ENST00000578485 302 ntBASIC3.5□□□□□ -1.85
VPS29Q9UBQ0 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS29Q9UBQ0 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS29Q9UBQ0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS29Q9UBQ0 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS29Q9UBQ0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS29Q9UBQ0 AC073073.2-201ENST00000609827 2578 ntBASIC3.5□□□□□ -1.85
VPS29Q9UBQ0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AC100871.1-201ENST00000507871 1456 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 OR4A15-201ENST00000314706 1035 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 RNU6-673P-201ENST00000365084 104 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 RPL32P23-201ENST00000397237 405 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 RN7SKP156-201ENST00000410308 342 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 TCEA1P4-201ENST00000415066 844 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 RPS12P23-201ENST00000419579 400 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AC009965.2-201ENST00000425328 970 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 MRPS18BP2-201ENST00000434310 759 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 ANP32BP2-201ENST00000454525 545 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 NIPA2P2-201ENST00000496376 1083 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AP001960.1-201ENST00000506494 658 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AP000926.4-201ENST00000527351 454 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 OR5AP1P-201ENST00000529730 940 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AC023161.2-201ENST00000551218 780 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AL161713.1-201ENST00000555538 145 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AC022916.3-201ENST00000592961 742 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AC084373.1-201ENST00000603311 235 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 AL713922.2-201ENST00000619384 716 ntBASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
VPS29Q9UBQ0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 RNA5SP42-201ENST00000364278 115 ntBASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 SNORA57.3-201ENST00000411095 141 ntBASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 AC002075.2-201ENST00000425207 252 ntBASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 OR4F13P-201ENST00000428478 931 ntBASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 NUTF2P7-201ENST00000453086 375 ntBASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 RPS3AP50-201ENST00000487064 803 ntBASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 HMGB3P14-201ENST00000494195 599 ntBASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 RNU6-579P-201ENST00000516879 102 ntBASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 HSPE1P5-201ENST00000561489 272 ntBASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 MIR5685-201ENST00000579080 79 ntBASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 MIR4738-201ENST00000579134 87 ntBASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 AC006077.1-201ENST00000604746 343 ntBASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VPS29Q9UBQ0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 AC007656.2-201ENST00000624902 4547 ntBASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 RN7SKP227-201ENST00000364445 330 ntBASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 TRGV6-201ENST00000417928 299 ntBASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 AC245054.1-201ENST00000420944 258 ntBASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 RPL30P3-201ENST00000424262 333 ntBASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.47□□□□□ -1.85
VPS29Q9UBQ0 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms