Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC125611.1-201ENST00000549563 229 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 GTF2IP8-201ENST00000560687 584 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 AL132657.2-201ENST00000564417 358 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 AC109446.2-201ENST00000567872 497 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.17□□□□□ -1.58
COL20A1Q9P218 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL20A1Q9P218 AP000776.1-201ENST00000530032 1663 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL20A1Q9P218 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL20A1Q9P218 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.17□□□□□ -1.58
COL20A1Q9P218 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL20A1Q9P218 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 CPHL1P-201ENST00000461341 3407 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL20A1Q9P218 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL20A1Q9P218 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL20A1Q9P218 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL20A1Q9P218 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 RNA5SP80-201ENST00000410475 111 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC103987.1-201ENST00000473394 348 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 RPL7P18-201ENST00000478965 734 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC093267.1-201ENST00000489176 961 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC023424.1-201ENST00000496058 459 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 RPF2P2-201ENST00000504693 896 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 AF279873.1-201ENST00000523393 313 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 AP001189.2-201ENST00000527320 189 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC068993.1-201ENST00000546724 589 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 SERPINE4P-201ENST00000554978 281 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC136624.4-201ENST00000573044 370 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AL109653.1-201ENST00000603091 248 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC069304.3-201ENST00000603938 1084 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC010200.2-201ENST00000605098 235 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AL158042.1-201ENST00000605338 460 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC116447.1-201ENST00000613153 453 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AL121890.2-201ENST00000617644 465 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC067852.7-201ENST00000623270 535 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AL512506.2-201ENST00000624472 458 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC068620.4-201ENST00000636730 1182 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 MIR3974-201ENST00000637126 96 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL20A1Q9P218 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL20A1Q9P218 AL731532.2-201ENST00000623542 1953 ntBASIC5.16□□□□□ -1.58
COL20A1Q9P218 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL20A1Q9P218 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL20A1Q9P218 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
COL20A1Q9P218 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.15□□□□□ -1.58
COL20A1Q9P218 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.58
COL20A1Q9P218 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL20A1Q9P218 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
COL20A1Q9P218 AL031595.2-201ENST00000624215 19071 ntBASIC5.15□□□□□ -1.58
COL20A1Q9P218 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.15□□□□□ -1.58
COL20A1Q9P218 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL20A1Q9P218 AL592291.1-201ENST00000403830 352 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 AL133264.1-201ENST00000407157 562 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC234781.2-201ENST00000426370 994 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 RPS12P10-201ENST00000427031 377 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 KATNBL1P3-201ENST00000443475 909 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 Z99714.1-201ENST00000450463 807 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 AL122001.1-201ENST00000457027 370 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 RPL21P71-201ENST00000465598 459 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC020890.1-201ENST00000491837 504 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC093840.1-201ENST00000511599 336 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.15□□□□□ -1.59
COL20A1Q9P218 ELOCP32-201ENST00000548625 324 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC008015.1-201ENST00000555505 465 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 OR4K7P-201ENST00000580232 945 ntBASIC5.15□□□□□ -1.59
COL20A1Q9P218 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms