Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 BNIP3P38-201ENST00000601117 544 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 AC245389.1-201ENST00000605141 529 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 AC022149.2-201ENST00000621061 203 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 AC243312.2-201ENST00000623340 601 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.74□□□□□ -1.81
CISHQ9NSE2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.74□□□□□ -1.81
CISHQ9NSE2 AL451142.2-201ENST00000429076 2090 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 AL445437.1-201ENST00000623157 3087 ntBASIC3.74□□□□□ -1.81
CISHQ9NSE2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CISHQ9NSE2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CISHQ9NSE2 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CISHQ9NSE2 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CISHQ9NSE2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CISHQ9NSE2 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CISHQ9NSE2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 OR13C3-201ENST00000374781 1108 ntBASIC3.73□□□□□ -1.81
CISHQ9NSE2 MIR200C-201ENST00000384980 68 ntBASIC3.73□□□□□ -1.81
CISHQ9NSE2 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 ATP5F1P3-201ENST00000397213 657 ntBASIC3.73□□□□□ -1.81
CISHQ9NSE2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 AL136116.1-201ENST00000403591 381 ntBASIC3.73□□□□□ -1.81
CISHQ9NSE2 AC068533.1-201ENST00000418542 415 ntBASIC3.73□□□□□ -1.81
CISHQ9NSE2 PPIAP3-201ENST00000450588 505 ntBASIC3.73□□□□□ -1.81
CISHQ9NSE2 RBMY2UP-201ENST00000453474 324 ntBASIC3.73□□□□□ -1.81
CISHQ9NSE2 AC007967.1-201ENST00000455422 1159 ntBASIC3.73□□□□□ -1.81
CISHQ9NSE2 AC091564.1-201ENST00000464563 479 ntBASIC3.73□□□□□ -1.81
CISHQ9NSE2 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 FCF1P3-201ENST00000496394 590 ntBASIC3.73□□□□□ -1.81
CISHQ9NSE2 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 OR5B10P-201ENST00000532869 642 ntBASIC3.73□□□□□ -1.81
CISHQ9NSE2 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 CYP2C60P-201ENST00000566088 139 ntBASIC3.73□□□□□ -1.81
CISHQ9NSE2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 SNORA51-201ENST00000606420 132 ntBASIC3.73□□□□□ -1.81
CISHQ9NSE2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CISHQ9NSE2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.73□□□□□ -1.81
CISHQ9NSE2 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 BX005019.1-201ENST00000561881 1810 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 MFSD8-233ENST00000641482 4860 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CISHQ9NSE2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CISHQ9NSE2 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 MIR218-2-201ENST00000385006 110 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 RN7SKP177-201ENST00000410567 355 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 RPS29P4-201ENST00000414733 161 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 VN1R31P-201ENST00000417498 730 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 RPL12P46-201ENST00000436610 195 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 RAB9AP5-201ENST00000437794 597 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 AC092641.1-201ENST00000440229 772 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 RAB9AP2-201ENST00000443911 597 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 RPS15AP29-201ENST00000445539 400 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CISHQ9NSE2 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CISHQ9NSE2 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 AC244258.1-201ENST00000637553 1071 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CISHQ9NSE2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CISHQ9NSE2 Z73965.1-201ENST00000623412 2297 ntBASIC3.72□□□□□ -1.81
CISHQ9NSE2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CISHQ9NSE2 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
CISHQ9NSE2 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CISHQ9NSE2 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CISHQ9NSE2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CISHQ9NSE2 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CISHQ9NSE2 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.71□□□□□ -1.82
CISHQ9NSE2 RPS12P5-201ENST00000423449 371 ntBASIC3.71□□□□□ -1.82
CISHQ9NSE2 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.71□□□□□ -1.82
CISHQ9NSE2 HMGN2P31-201ENST00000432430 273 ntBASIC3.71□□□□□ -1.82
CISHQ9NSE2 AL035458.1-201ENST00000433096 585 ntBASIC3.71□□□□□ -1.82
CISHQ9NSE2 MTND2P2-201ENST00000434633 945 ntBASIC3.71□□□□□ -1.82
CISHQ9NSE2 AL357552.1-201ENST00000445254 415 ntBASIC3.71□□□□□ -1.82
CISHQ9NSE2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CISHQ9NSE2 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.71□□□□□ -1.82
CISHQ9NSE2 AC025518.1-201ENST00000479856 347 ntBASIC3.71□□□□□ -1.82
CISHQ9NSE2 TRBV8-1-201ENST00000481590 279 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms