Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 MIR4637-201ENST00000582405 84 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AC103792.1-201ENST00000603591 919 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AC097468.3-201ENST00000607956 456 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AC145207.9-201ENST00000623802 325 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AP003122.6-201ENST00000623831 495 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 ATE1-AS1-202ENST00000636460 506 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AC002525.1-201ENST00000624392 1622 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 OR4G11P-202ENST00000642116 1414 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 RNF6P1-201ENST00000444889 1784 ntBASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SEC61A2Q9H9S3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC093311.1-201ENST00000506586 2021 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AL442128.2-201ENST00000620246 1824 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AL159987.1-201ENST00000347911 293 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 Y_RNA.1-201ENST00000352915 104 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 MIR375-201ENST00000362103 64 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 SNORA64.1-201ENST00000362600 132 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 RNU6-216P-201ENST00000363282 104 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 RNA5SP394-201ENST00000364216 119 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AL390316.1-201ENST00000406279 553 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 VN1R8P-201ENST00000407739 893 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 RN7SKP222-201ENST00000410651 315 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC092634.6-201ENST00000418558 192 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 OR10T1P-201ENST00000424327 947 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 NIPA2P1-201ENST00000426223 976 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 BX890604.2-201ENST00000427883 474 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC138761.5-201ENST00000433967 325 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 LSM1P1-201ENST00000438629 273 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 MEMO1P3-201ENST00000459811 302 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC017015.1-201ENST00000477387 286 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 RPS29P25-201ENST00000481709 171 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC022215.1-201ENST00000481770 362 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC009120.1-201ENST00000493458 473 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 RPL15P21-201ENST00000495592 567 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC104109.1-201ENST00000498563 436 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 OR5M14P-201ENST00000506803 618 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 OR5D2P-201ENST00000524390 911 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC079600.1-201ENST00000550326 297 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 RPL21P5-201ENST00000554662 472 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 HMGN2P47-201ENST00000559378 272 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 RPS3AP23-202ENST00000574601 686 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC090312.2-201ENST00000582687 378 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 MIR4795-201ENST00000584182 89 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC022916.3-201ENST00000592961 742 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AP001429.1-201ENST00000602568 530 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AC007363.1-201ENST00000604736 620 ntBASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SEC61A2Q9H9S3 MRE11P1-201ENST00000464884 2127 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 214.8 ms