Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
AMBRA1Q9C0C7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 HSPA8P17-201ENST00000427029 1382 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC235565.1-201ENST00000456962 1325 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 Y_RNA.25-201ENST00000362528 102 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 RNU6-249P-201ENST00000363016 102 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 RNA5SP335-201ENST00000363817 110 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 RN7SKP103-201ENST00000363848 320 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 RNU6-115P-201ENST00000364310 107 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 RNU6-171P-201ENST00000384354 107 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 MIR105-1-201ENST00000385222 81 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 EI24P3-201ENST00000399046 1062 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AL390316.1-201ENST00000406279 553 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 FCF1P2-201ENST00000415284 583 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC234782.4-201ENST00000417646 1048 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 NMNAT1P2-201ENST00000435192 860 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 MTND1P4-201ENST00000435196 415 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 Z74696.2-201ENST00000436514 498 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 CYCSP12-201ENST00000437729 300 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 RAB11AP1-201ENST00000442978 646 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 BMI1P1-201ENST00000445879 941 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AL356981.1-201ENST00000454879 684 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC091685.2-201ENST00000454924 864 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 ARPC3P2-201ENST00000457786 533 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC093899.1-201ENST00000457984 376 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 RN7SL172P-201ENST00000460535 303 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 HMGN2P25-201ENST00000486956 268 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC108078.3-201ENST00000502633 489 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 RNA5SP464-201ENST00000516251 108 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 GTF2IP22-201ENST00000554443 182 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 PSMB7P1-201ENST00000556349 514 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC091488.1-201ENST00000604239 660 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 RBM11P1-201ENST00000604951 799 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC079228.1-201ENST00000624774 1049 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC120349.2-201ENST00000625002 298 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC026634.1-201ENST00000634369 198 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 SAMMSON-209ENST00000641222 1100 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 AL606537.1-201ENST00000607258 2011 ntBASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
AMBRA1Q9C0C7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 Y_RNA.6-201ENST00000362350 114 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 RNU6-216P-201ENST00000363282 104 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 SNORA75-201ENST00000384158 137 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 RNU2-65P-201ENST00000410162 185 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 FCF1P9-201ENST00000412546 282 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 MTCYBP38-201ENST00000417160 1123 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 MTCO3P1-205ENST00000422088 832 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AC004448.2-201ENST00000422360 586 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AC093698.1-201ENST00000423843 571 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AC241584.1-201ENST00000438469 1241 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AL357520.1-201ENST00000441557 453 ntBASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.79□□□□□ -1.64
AMBRA1Q9C0C7 RPL18AP17-201ENST00000455326 198 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms