Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 FAM92A1P1-201ENST00000528023 890 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AL512360.1-201ENST00000555346 234 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AL513327.3-201ENST00000602618 469 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 YWHAQP7-201ENST00000603536 658 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AC103792.1-201ENST00000603591 919 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AL133481.2-203ENST00000607558 139 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 MLECP1-201ENST00000615893 709 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AC136475.10-201ENST00000620253 385 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AC231657.1-201ENST00000624313 397 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 MIR7641-1-201ENST00000627518 61 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 MT-RNR2-201ENST00000387347 1559 ntBASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNGAP1Q96PV0 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 RPS3AP9-201ENST00000417027 792 ntBASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AC083875.1-201ENST00000419509 405 ntBASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AC104850.1-201ENST00000435940 476 ntBASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 RPL7P59-201ENST00000447700 943 ntBASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AC010493.1-201ENST00000513479 292 ntBASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 SLC2A13P1-201ENST00000531560 322 ntBASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AL442663.2-201ENST00000554385 511 ntBASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AL359212.1-201ENST00000556608 614 ntBASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AC060780.2-201ENST00000589047 198 ntBASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AC025857.2-201ENST00000602711 238 ntBASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 IQCB2P-201ENST00000401788 1633 ntBASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 AC015799.1-201ENST00000622996 3122 ntBASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNGAP1Q96PV0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 MIR133B-201ENST00000362210 119 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 SNORA62-201ENST00000365493 153 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 RNU6-809P-201ENST00000384461 107 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 Y_RNA.548-201ENST00000384656 105 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 ARPC3P1-201ENST00000437218 533 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 RABEPKP1-201ENST00000440529 1026 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 AL590365.1-201ENST00000450788 243 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 ACTR3P3-201ENST00000480448 893 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 PPP1R11P1-201ENST00000486095 376 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 RNA5SP135-201ENST00000517019 125 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 AC136777.2-201ENST00000522979 358 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 AF235103.2-201ENST00000525753 346 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 OR1F2P-201ENST00000570470 933 ntBASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC6.28□□□□□ -1.4
SYNGAP1Q96PV0 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms