Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VMP1Q96GC9 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VMP1Q96GC9 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VMP1Q96GC9 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VMP1Q96GC9 RNU6-334P-201ENST00000517072 102 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 OR5D17P-201ENST00000531492 978 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC091515.1-201ENST00000548110 679 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 ZNF192P1-203ENST00000565888 810 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC209154.1-201ENST00000582156 337 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC234771.5-201ENST00000600161 514 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC133794.1-201ENST00000602731 914 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC092474.3-201ENST00000603022 568 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VMP1Q96GC9 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
VMP1Q96GC9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VMP1Q96GC9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VMP1Q96GC9 ZNF137P-201ENST00000456718 1920 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VMP1Q96GC9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VMP1Q96GC9 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VMP1Q96GC9 AL359893.1-201ENST00000447628 1580 ntBASIC4.36□□□□□ -1.71
VMP1Q96GC9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VMP1Q96GC9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VMP1Q96GC9 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VMP1Q96GC9 OR56B2P-201ENST00000317102 954 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 RNU1-85P-201ENST00000364127 164 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 RNU6-398P-201ENST00000384143 109 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 RNU6-932P-201ENST00000391108 106 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 RPS3AP23-201ENST00000401762 784 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 ARL4AP5-201ENST00000404372 599 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 AL391219.1-201ENST00000422570 483 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC233981.1-201ENST00000423224 461 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 MTCO2P1-201ENST00000424648 477 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 RPP40P1-201ENST00000426762 456 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC096632.1-201ENST00000427395 310 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VMP1Q96GC9 NAP1L1P3-201ENST00000462291 880 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 RN7SL354P-201ENST00000469282 294 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 RN7SL738P-201ENST00000470264 297 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC012158.1-204ENST00000483430 465 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 RPL36AP41-201ENST00000493820 306 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC119751.1-201ENST00000513357 765 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 IGKV2D-36-201ENST00000518643 226 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VMP1Q96GC9 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC092470.1-201ENST00000546187 132 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 CR383656.14-201ENST00000551951 406 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 NIFKP8-201ENST00000560500 874 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC008759.1-201ENST00000589783 983 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 AL020997.3-201ENST00000602843 359 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC020634.1-201ENST00000608701 549 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC105227.2-201ENST00000615075 605 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 AL355578.1-201ENST00000607405 1328 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VMP1Q96GC9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VMP1Q96GC9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 AC000367.1-201ENST00000452711 1766 ntBASIC4.35□□□□□ -1.71
VMP1Q96GC9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.35□□□□□ -1.71
VMP1Q96GC9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VMP1Q96GC9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VMP1Q96GC9 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
VMP1Q96GC9 OR4K15-201ENST00000305051 1216 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 RNA5SP505-201ENST00000364748 108 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 RNA5SP397-201ENST00000391323 118 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 AL049697.2-201ENST00000403708 294 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 RPL26P29-201ENST00000415623 438 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 Z74021.1-201ENST00000423610 407 ntBASIC4.34□□□□□ -1.71
VMP1Q96GC9 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.34□□□□□ -1.71
VMP1Q96GC9 AC114973.1-201ENST00000429057 632 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 254.4 ms