Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 RBPJP7-201ENST00000442803 1447 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 RBPJP5-201ENST00000449433 1447 ntBASIC5.46□□□□□ -1.54
ATG4DQ86TL0 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.46□□□□□ -1.54
ATG4DQ86TL0 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 COX6B1P3-201ENST00000312310 260 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC073343.1-201ENST00000328239 651 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 Y_RNA.47-201ENST00000362697 108 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 RN7SKP275-201ENST00000364626 301 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 SNORA51.9-201ENST00000384295 124 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 SNORD116-23-201ENST00000384645 92 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 RNU2-9P-201ENST00000410194 145 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 OR10T1P-201ENST00000424327 947 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 DPY19L1P2-201ENST00000426647 915 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 SRIP2-201ENST00000428470 166 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 RPS3AP38-201ENST00000435889 763 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AL590399.4-201ENST00000436561 601 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC012512.1-201ENST00000446594 718 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 MTCO1P27-201ENST00000448269 226 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 YWHAEP1-201ENST00000453697 763 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC135999.1-201ENST00000478962 479 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC013356.1-201ENST00000489027 564 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC107222.1-201ENST00000510899 637 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 TOMM22P4-201ENST00000511318 336 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 NPM1P41-201ENST00000512920 831 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 RNU6-1004P-201ENST00000516584 111 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 Vault.3-201ENST00000516676 95 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 SNORA25.17-201ENST00000517184 124 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC022634.1-201ENST00000520765 532 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC022861.1-201ENST00000522981 663 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AL163153.1-201ENST00000554223 283 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AL161670.1-201ENST00000554348 137 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC079075.1-201ENST00000559543 878 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 FAM27E2-201ENST00000619668 403 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC099654.6-201ENST00000636487 512 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 NUP58P1-201ENST00000502546 1738 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 SAMMSON-210ENST00000641260 1308 ntBASIC5.45□□□□□ -1.54
ATG4DQ86TL0 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4DQ86TL0 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
ATG4DQ86TL0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
ATG4DQ86TL0 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.44□□□□□ -1.54
ATG4DQ86TL0 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4DQ86TL0 AC005224.3-201ENST00000584683 2140 ntBASIC5.44□□□□□ -1.54
ATG4DQ86TL0 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
ATG4DQ86TL0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4DQ86TL0 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4DQ86TL0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
ATG4DQ86TL0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.44□□□□□ -1.54
ATG4DQ86TL0 Y_RNA.149-201ENST00000363558 117 ntBASIC5.44□□□□□ -1.54
ATG4DQ86TL0 RNA5SP211-201ENST00000365516 117 ntBASIC5.44□□□□□ -1.54
ATG4DQ86TL0 RNU6-769P-201ENST00000384407 104 ntBASIC5.44□□□□□ -1.54
ATG4DQ86TL0 RNA5SP122-201ENST00000384457 108 ntBASIC5.44□□□□□ -1.54
ATG4DQ86TL0 AC004386.1-201ENST00000393214 761 ntBASIC5.44□□□□□ -1.54
ATG4DQ86TL0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms