Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC092647.2-201ENST00000452998 253 ntBASIC4.1□□□□□ -1.75
C11orf88Q6PI97 CEACAMP4-201ENST00000457676 421 ntBASIC4.1□□□□□ -1.75
C11orf88Q6PI97 AC010307.1-201ENST00000467206 836 ntBASIC4.1□□□□□ -1.75
C11orf88Q6PI97 AC012158.1-204ENST00000483430 465 ntBASIC4.1□□□□□ -1.75
C11orf88Q6PI97 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 RPL23AP55-201ENST00000498163 452 ntBASIC4.1□□□□□ -1.75
C11orf88Q6PI97 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 MTCYBP41-201ENST00000528913 1123 ntBASIC4.1□□□□□ -1.75
C11orf88Q6PI97 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 AC122134.1-202ENST00000569111 1201 ntBASIC4.1□□□□□ -1.75
C11orf88Q6PI97 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 AP003973.1-201ENST00000604639 691 ntBASIC4.1□□□□□ -1.75
C11orf88Q6PI97 VN1R7P-201ENST00000619242 903 ntBASIC4.1□□□□□ -1.75
C11orf88Q6PI97 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 MIR4278-201ENST00000636094 69 ntBASIC4.1□□□□□ -1.75
C11orf88Q6PI97 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.1□□□□□ -1.75
C11orf88Q6PI97 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.1□□□□□ -1.75
C11orf88Q6PI97 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.1□□□□□ -1.75
C11orf88Q6PI97 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AL592148.3-201ENST00000608771 2646 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 RNU1-108P-201ENST00000362556 161 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 MIR921-201ENST00000401133 56 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AP002530.1-201ENST00000405705 684 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AL024507.1-201ENST00000412741 274 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 COX6B1P1-201ENST00000415962 213 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 MTND2P16-201ENST00000419987 799 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 OR2AM1P-201ENST00000422137 422 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC093698.1-201ENST00000423843 571 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 HSFY1P1-201ENST00000423928 1178 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AL590762.4-201ENST00000425885 253 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC011242.1-201ENST00000433596 1158 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC093414.1-201ENST00000434712 514 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 TDGF1P1-201ENST00000445734 527 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 NPM1P13-201ENST00000452663 865 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC244505.3-201ENST00000454598 187 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC022034.3-201ENST00000471393 478 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 BX284632.1-201ENST00000478218 541 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 TRAV31-201ENST00000502780 342 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 DYNLL1P6-201ENST00000503440 264 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 RNA5SP392-201ENST00000516905 112 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 IGKV1-32-201ENST00000519290 311 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC104417.1-201ENST00000523974 751 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 CR383656.6-201ENST00000550518 394 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 NMNAT1P1-201ENST00000554095 876 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC093519.1-201ENST00000566109 298 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC009101.1-201ENST00000568135 242 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC011453.2-201ENST00000603737 729 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AP005137.2-201ENST00000609238 400 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC012531.5-201ENST00000611375 151 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC080188.3-201ENST00000624842 748 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
C11orf88Q6PI97 ECM1P2-201ENST00000503354 1577 ntBASIC4.09□□□□□ -1.75
C11orf88Q6PI97 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
C11orf88Q6PI97 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
C11orf88Q6PI97 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.09□□□□□ -1.76
C11orf88Q6PI97 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms