Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 RPL23AP57-201ENST00000332361 466 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 RNU4-91P-201ENST00000364778 135 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 RN7SKP153-201ENST00000365026 316 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 OR5H15-201ENST00000383696 930 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 SNORA70.6-201ENST00000383934 134 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 MIR320C1-201ENST00000408566 88 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 TPMTP2-201ENST00000414372 726 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 MTCO3P41-201ENST00000414801 328 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AL133325.1-201ENST00000421090 382 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 CHEK2P5-201ENST00000423877 246 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 SRSF1P1-201ENST00000424058 520 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AL138785.1-201ENST00000425821 331 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 PRELID3BP10-201ENST00000431957 584 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC012075.1-201ENST00000436549 580 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 RPL36AP15-201ENST00000444514 266 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 ST13P20-201ENST00000447996 1065 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 USP9YP34-201ENST00000453983 808 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC079168.1-201ENST00000458741 345 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 RNA5SP269-201ENST00000459032 137 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC017015.1-201ENST00000477387 286 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 SIAH1P1-201ENST00000479411 923 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 EIF3LP3-201ENST00000495197 822 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AP003033.1-201ENST00000527244 415 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC068587.4-201ENST00000533893 186 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC092470.1-201ENST00000546187 132 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AL390726.5-202ENST00000564800 256 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC233702.9-201ENST00000581528 203 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC012065.4-201ENST00000602445 679 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 SUGT1P3-202ENST00000604259 383 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AL133338.2-201ENST00000604292 736 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AL139286.2-201ENST00000606838 396 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC080013.4-201ENST00000607624 649 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC000068.2-201ENST00000608816 460 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC103710.4-201ENST00000609301 899 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC090116.1-201ENST00000615679 446 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 MIR6133-201ENST00000617057 108 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 CYP3A51P-201ENST00000633513 256 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 GDI2P1-201ENST00000429312 1336 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AC104964.3-201ENST00000606115 2860 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 MTND4P4-201ENST00000439033 1366 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 AP001029.2-203ENST00000589795 4910 ntBASIC4.38□□□□□ -1.71
CCDC144NLQ6NUI1 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CCDC144NLQ6NUI1 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC144NLQ6NUI1 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC144NLQ6NUI1 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CCDC144NLQ6NUI1 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
CCDC144NLQ6NUI1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CCDC144NLQ6NUI1 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC144NLQ6NUI1 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC144NLQ6NUI1 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC144NLQ6NUI1 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC144NLQ6NUI1 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CCDC144NLQ6NUI1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC144NLQ6NUI1 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC144NLQ6NUI1 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
CCDC144NLQ6NUI1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms