Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.34□□□□□ -1.88
CCDC58Q4VC31 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.34□□□□□ -1.88
CCDC58Q4VC31 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CCDC58Q4VC31 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 RNU6-283P-201ENST00000364788 107 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 RNA5SP97-201ENST00000365006 84 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 RBMY2KP-201ENST00000418221 992 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 RPL17P36-201ENST00000420302 549 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 TCEA1P2-201ENST00000420496 906 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 OSTCP5-201ENST00000425293 453 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 MTCO3P21-201ENST00000430791 643 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 AC099563.1-201ENST00000456086 418 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 NPM1P17-201ENST00000479221 602 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 MTND4LP22-201ENST00000508209 276 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 POU5F1P7-201ENST00000508759 541 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 RN7SL600P-201ENST00000581811 299 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 AL163642.2-201ENST00000604722 1019 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 AC100827.5-201ENST00000615883 426 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC58Q4VC31 AC012618.3-205ENST00000637896 1496 ntBASIC3.33□□□□□ -1.88
CCDC58Q4VC31 MAPK10-362ENST00000641864 4484 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 AC004972.1-201ENST00000623934 2209 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 IGKV7-3-201ENST00000357453 298 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 RNU4-39P-201ENST00000362455 127 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 RNU6-805P-201ENST00000365643 106 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 RNA5SP424-201ENST00000390988 115 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 RPS27AP11-201ENST00000402798 447 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 XKRYP4-201ENST00000414395 483 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 AL691449.1-201ENST00000426570 421 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 RPL23AP4-201ENST00000427757 463 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 SNORA71B-202ENST00000439232 272 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 XKRYP5-201ENST00000449659 483 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 RPL7P5-201ENST00000471472 736 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 AC105137.1-201ENST00000484355 562 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 AC005921.1-201ENST00000510589 286 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 RAC1P2-201ENST00000511164 579 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 AP000926.4-201ENST00000527351 454 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 AL121766.1-201ENST00000547436 487 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 AC005951.1-201ENST00000576706 485 ntBASIC3.32□□□□□ -1.88
CCDC58Q4VC31 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC58Q4VC31 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AC110792.3-201ENST00000595906 1614 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 RPS26P8-201ENST00000393490 348 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 ZNF602P-201ENST00000405929 924 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AC007563.3-201ENST00000433233 371 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 BX679664.1-201ENST00000434429 253 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AL356276.2-201ENST00000435919 558 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AC009969.1-201ENST00000438726 172 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 RPL7P59-201ENST00000447700 943 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AC125238.1-201ENST00000448842 249 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AC091179.1-201ENST00000461606 579 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 TRBV8-1-201ENST00000481590 279 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 MTCO1P49-201ENST00000523429 802 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AC010735.1-201ENST00000567305 1026 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AP005901.4-201ENST00000577336 569 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 GMCL1P2-201ENST00000605230 823 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AC018754.1-201ENST00000607486 925 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 AC016957.2-201ENST00000616998 848 ntBASIC3.31□□□□□ -1.88
CCDC58Q4VC31 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC58Q4VC31 CDRT1-208ENST00000630868 794 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms