Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GABPAQ06546 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GABPAQ06546 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
GABPAQ06546 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
GABPAQ06546 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
GABPAQ06546 AC105402.1-201ENST00000413336 545 ntBASIC4.48□□□□□ -1.69
GABPAQ06546 AC093578.1-201ENST00000415219 368 ntBASIC4.48□□□□□ -1.69
GABPAQ06546 AL451062.2-201ENST00000427515 271 ntBASIC4.48□□□□□ -1.69
GABPAQ06546 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.48□□□□□ -1.69
GABPAQ06546 AC069285.2-201ENST00000440210 275 ntBASIC4.48□□□□□ -1.69
GABPAQ06546 HMGB3P9-201ENST00000441799 583 ntBASIC4.48□□□□□ -1.69
GABPAQ06546 AC084198.1-201ENST00000477747 402 ntBASIC4.48□□□□□ -1.69
GABPAQ06546 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.48□□□□□ -1.69
GABPAQ06546 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.48□□□□□ -1.69
GABPAQ06546 AC022695.1-201ENST00000522089 237 ntBASIC4.48□□□□□ -1.69
GABPAQ06546 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.48□□□□□ -1.69
GABPAQ06546 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.48□□□□□ -1.69
GABPAQ06546 AC008083.2-201ENST00000546707 476 ntBASIC4.48□□□□□ -1.69
GABPAQ06546 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.48□□□□□ -1.69
GABPAQ06546 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.48□□□□□ -1.69
GABPAQ06546 AC022884.3-201ENST00000579571 248 ntBASIC4.48□□□□□ -1.69
GABPAQ06546 CBX3P2-202ENST00000583365 535 ntBASIC4.48□□□□□ -1.69
GABPAQ06546 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
GABPAQ06546 AL671309.1-201ENST00000603750 544 ntBASIC4.48□□□□□ -1.69
GABPAQ06546 AC110792.4-201ENST00000609843 298 ntBASIC4.48□□□□□ -1.69
GABPAQ06546 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.48□□□□□ -1.69
GABPAQ06546 AP006248.3-201ENST00000623580 594 ntBASIC4.48□□□□□ -1.69
GABPAQ06546 AC090617.9-201ENST00000623751 147 ntBASIC4.48□□□□□ -1.69
GABPAQ06546 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
GABPAQ06546 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
GABPAQ06546 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GABPAQ06546 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
GABPAQ06546 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GABPAQ06546 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GABPAQ06546 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GABPAQ06546 AC097504.1-201ENST00000515103 2415 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 AL450326.2-201ENST00000421913 1962 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
GABPAQ06546 UBE3AP2-201ENST00000429033 2259 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
GABPAQ06546 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
GABPAQ06546 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GABPAQ06546 RNA5SP51-201ENST00000364750 119 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GABPAQ06546 TAF9BP2-201ENST00000400856 499 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 CYCSP10-201ENST00000417973 294 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 AL035423.1-201ENST00000420331 213 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
GABPAQ06546 ELOCP8-201ENST00000439309 332 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 ELOCP15-201ENST00000442090 332 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.47□□□□□ -1.69
GABPAQ06546 RPL7P48-201ENST00000461513 746 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 AC108941.1-201ENST00000502853 530 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 AC010468.3-201ENST00000508225 458 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 RN7SKP157-201ENST00000516174 282 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 RNU6-1004P-201ENST00000516584 111 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.47□□□□□ -1.69
GABPAQ06546 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.47□□□□□ -1.69
GABPAQ06546 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.47□□□□□ -1.69
GABPAQ06546 AC090877.1-201ENST00000561418 344 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.47□□□□□ -1.69
GABPAQ06546 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.47□□□□□ -1.69
GABPAQ06546 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.47□□□□□ -1.69
GABPAQ06546 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.47□□□□□ -1.69
GABPAQ06546 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.47□□□□□ -1.69
GABPAQ06546 CCDC58P3-201ENST00000590792 430 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 KATNBL1P5-201ENST00000605015 517 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 AL034408.1-202ENST00000636088 415 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 ATE1-AS1-202ENST00000636460 506 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.47□□□□□ -1.69
GABPAQ06546 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
GABPAQ06546 AC009093.8-201ENST00000641769 292 ntBASIC4.47□□□□□ -1.69
GABPAQ06546 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
GABPAQ06546 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
GABPAQ06546 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GABPAQ06546 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
GABPAQ06546 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
GABPAQ06546 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
GABPAQ06546 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GABPAQ06546 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.46□□□□□ -1.69
GABPAQ06546 DDX18P3-201ENST00000404856 2007 ntBASIC4.46□□□□□ -1.69
GABPAQ06546 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.46□□□□□ -1.7
GABPAQ06546 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
GABPAQ06546 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.46□□□□□ -1.7
GABPAQ06546 LINC01881-201ENST00000416103 412 ntBASIC4.46□□□□□ -1.7
GABPAQ06546 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
GABPAQ06546 AL590609.2-201ENST00000421430 368 ntBASIC4.46□□□□□ -1.7
GABPAQ06546 AC069157.1-201ENST00000421749 137 ntBASIC4.46□□□□□ -1.7
GABPAQ06546 MORF4L1P7-201ENST00000426038 703 ntBASIC4.46□□□□□ -1.7
GABPAQ06546 AC073508.1-201ENST00000428866 656 ntBASIC4.46□□□□□ -1.7
GABPAQ06546 TPTE2P3-201ENST00000441562 1189 ntBASIC4.46□□□□□ -1.7
GABPAQ06546 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.46□□□□□ -1.7
GABPAQ06546 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.46□□□□□ -1.7
GABPAQ06546 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.46□□□□□ -1.7
GABPAQ06546 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.46□□□□□ -1.7
GABPAQ06546 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.46□□□□□ -1.7
GABPAQ06546 AC006499.5-201ENST00000505037 514 ntBASIC4.46□□□□□ -1.7
GABPAQ06546 MTND3P24-201ENST00000506306 329 ntBASIC4.46□□□□□ -1.7
GABPAQ06546 MTND2P7-201ENST00000521337 640 ntBASIC4.46□□□□□ -1.7
GABPAQ06546 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms