Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC039056.2-201ENST00000622261 511 ntBASIC3.71□□□□□ -1.82
AP1S1P61966 AL021368.2-201ENST00000606125 5352 ntBASIC3.71□□□□□ -1.82
AP1S1P61966 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
AP1S1P61966 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
AP1S1P61966 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
AP1S1P61966 RNA5SP124-201ENST00000362739 110 ntBASIC3.7□□□□□ -1.82
AP1S1P61966 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
AP1S1P61966 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
AP1S1P61966 ATP5F1P4-201ENST00000397288 746 ntBASIC3.7□□□□□ -1.82
AP1S1P61966 AL035423.1-201ENST00000420331 213 ntBASIC3.7□□□□□ -1.82
AP1S1P61966 RPL21P109-201ENST00000422213 475 ntBASIC3.7□□□□□ -1.82
AP1S1P61966 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.7□□□□□ -1.82
AP1S1P61966 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
AP1S1P61966 AC010307.1-201ENST00000467206 836 ntBASIC3.7□□□□□ -1.82
AP1S1P61966 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.7□□□□□ -1.82
AP1S1P61966 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.7□□□□□ -1.82
AP1S1P61966 SNORD116-26-201ENST00000516006 96 ntBASIC3.7□□□□□ -1.82
AP1S1P61966 RNU1-95P-201ENST00000516357 160 ntBASIC3.7□□□□□ -1.82
AP1S1P61966 RNU1-128P-201ENST00000516704 160 ntBASIC3.7□□□□□ -1.82
AP1S1P61966 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.7□□□□□ -1.82
AP1S1P61966 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.7□□□□□ -1.82
AP1S1P61966 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.7□□□□□ -1.82
AP1S1P61966 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.7□□□□□ -1.82
AP1S1P61966 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.7□□□□□ -1.82
AP1S1P61966 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.7□□□□□ -1.82
AP1S1P61966 CR392039.5-201ENST00000623201 510 ntBASIC3.7□□□□□ -1.82
AP1S1P61966 AL732618.1-201ENST00000623251 301 ntBASIC3.7□□□□□ -1.82
AP1S1P61966 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.7□□□□□ -1.82
AP1S1P61966 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.7□□□□□ -1.82
AP1S1P61966 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
AP1S1P61966 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
AP1S1P61966 AC009313.2-201ENST00000417893 1941 ntBASIC3.7□□□□□ -1.82
AP1S1P61966 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
AP1S1P61966 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
AP1S1P61966 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.69□□□□□ -1.82
AP1S1P61966 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.69□□□□□ -1.82
AP1S1P61966 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.69□□□□□ -1.82
AP1S1P61966 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.69□□□□□ -1.82
AP1S1P61966 ZNF285B-201ENST00000561698 1767 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.69□□□□□ -1.82
AP1S1P61966 RNA5SP51-201ENST00000364750 119 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 SNORA5A-201ENST00000384111 134 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 SNORD3H-201ENST00000384486 214 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 RNU1-89P-201ENST00000384592 164 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 MTHFD2P2-201ENST00000407725 247 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 RAB9AP3-201ENST00000412737 573 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 AC009237.5-201ENST00000414271 501 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.69□□□□□ -1.82
AP1S1P61966 MTND2P2-201ENST00000434633 945 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 NDUFB1P1-201ENST00000435191 180 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.69□□□□□ -1.82
AP1S1P61966 RAB9AP1-201ENST00000449393 573 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 MTCO3P20-201ENST00000454926 688 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 AL136097.1-201ENST00000456945 913 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 SNORD105B-201ENST00000458770 79 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 RPL9P32-201ENST00000464118 620 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 AC018635.1-201ENST00000468292 1030 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 AC006511.1-201ENST00000470614 315 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.69□□□□□ -1.82
AP1S1P61966 RN7SKP18-201ENST00000516005 275 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 RNA5SP143-201ENST00000516936 115 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 IGKV2-23-201ENST00000518729 323 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 TRMT10BP1-201ENST00000519377 943 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.69□□□□□ -1.82
AP1S1P61966 TRAV15-201ENST00000556680 249 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.69□□□□□ -1.82
AP1S1P61966 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.69□□□□□ -1.82
AP1S1P61966 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.69□□□□□ -1.82
AP1S1P61966 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.69□□□□□ -1.82
AP1S1P61966 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.69□□□□□ -1.82
AP1S1P61966 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC3.69□□□□□ -1.82
AP1S1P61966 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
AP1S1P61966 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
AP1S1P61966 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.69□□□□□ -1.82
AP1S1P61966 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
AP1S1P61966 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.69□□□□□ -1.82
AP1S1P61966 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
AP1S1P61966 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.68□□□□□ -1.82
AP1S1P61966 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S1P61966 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S1P61966 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S1P61966 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S1P61966 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S1P61966 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
AP1S1P61966 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
AP1S1P61966 SNORA62.3-201ENST00000365110 153 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.68□□□□□ -1.82
AP1S1P61966 AC245054.1-201ENST00000420944 258 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 RPS26P40-201ENST00000435209 294 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.68□□□□□ -1.82
AP1S1P61966 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.68□□□□□ -1.82
AP1S1P61966 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.68□□□□□ -1.82
AP1S1P61966 RN7SL93P-201ENST00000463035 293 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.68□□□□□ -1.82
AP1S1P61966 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.68□□□□□ -1.82
AP1S1P61966 RN7SKP83-201ENST00000516512 178 ntBASIC3.68□□□□□ -1.82
AP1S1P61966 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.68□□□□□ -1.82
AP1S1P61966 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.68□□□□□ -1.82
AP1S1P61966 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.68□□□□□ -1.82
AP1S1P61966 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms