Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 GPS2P1-201ENST00000411761 986 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 AL121878.1-201ENST00000418638 859 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.82□□□□□ -1.64
CLRN1P58418 GLRXP1-201ENST00000423261 334 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.82□□□□□ -1.64
CLRN1P58418 AC007742.1-201ENST00000425789 329 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 RPS29P14-201ENST00000431518 171 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 ELOCP26-201ENST00000436067 329 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 AL161636.2-201ENST00000445179 927 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 MTCO1P27-201ENST00000448269 226 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 AL590365.1-201ENST00000450788 243 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.82□□□□□ -1.64
CLRN1P58418 AL645937.3-201ENST00000453647 936 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.82□□□□□ -1.64
CLRN1P58418 AP000797.2-201ENST00000475768 606 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.82□□□□□ -1.64
CLRN1P58418 AC091133.4-201ENST00000511142 308 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 AC008549.1-201ENST00000512900 643 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 SCARNA20.4-201ENST00000516969 131 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.82□□□□□ -1.64
CLRN1P58418 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.82□□□□□ -1.64
CLRN1P58418 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.82□□□□□ -1.64
CLRN1P58418 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.82□□□□□ -1.64
CLRN1P58418 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.82□□□□□ -1.64
CLRN1P58418 AC015720.2-201ENST00000567709 334 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.82□□□□□ -1.64
CLRN1P58418 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLRN1P58418 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLRN1P58418 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLRN1P58418 MIR4637-201ENST00000582405 84 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 MIR4307-201ENST00000582802 84 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 PSMA6P4-201ENST00000603247 718 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 AC108738.1-201ENST00000603703 237 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 AC112191.3-201ENST00000604371 277 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 IMMP1LP1-201ENST00000605170 488 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 HSPE1P14-201ENST00000605812 302 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.82□□□□□ -1.64
CLRN1P58418 AP001506.1-201ENST00000615444 211 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 AC007014.2-201ENST00000615581 479 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 AC108479.2-201ENST00000617314 601 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 AC074140.1-201ENST00000621617 208 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.82□□□□□ -1.64
CLRN1P58418 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CLRN1P58418 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.82□□□□□ -1.64
CLRN1P58418 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.82□□□□□ -1.64
CLRN1P58418 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLRN1P58418 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLRN1P58418 AP000542.2-201ENST00000623199 6179 ntBASIC4.82□□□□□ -1.64
CLRN1P58418 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLRN1P58418 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.82□□□□□ -1.64
CLRN1P58418 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLRN1P58418 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CLRN1P58418 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLRN1P58418 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLRN1P58418 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLRN1P58418 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLRN1P58418 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLRN1P58418 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.81□□□□□ -1.64
CLRN1P58418 AC107081.3-201ENST00000612715 2034 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 RNU1-85P-201ENST00000364127 164 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 SNORD115-47-201ENST00000391226 86 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AL031985.1-201ENST00000392713 418 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 HSPA8P15-201ENST00000401676 786 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CLRN1P58418 RNA5SP178-201ENST00000410380 128 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLRN1P58418 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 NPM1P24-201ENST00000428039 894 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 NPM1P34-201ENST00000428821 893 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLRN1P58418 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 SNRPEP7-201ENST00000438350 220 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AC105399.1-202ENST00000447303 205 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.81□□□□□ -1.64
CLRN1P58418 RNU7-136P-201ENST00000458819 69 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AL121769.1-201ENST00000469473 401 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 RPS15AP17-201ENST00000470598 390 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 RPL7AP10-201ENST00000481016 791 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 AC106872.3-201ENST00000495104 446 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 RPSAP51-201ENST00000497462 645 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 IGBP1P4-201ENST00000503202 879 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.81□□□□□ -1.64
CLRN1P58418 AC108064.1-201ENST00000513791 460 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.81□□□□□ -1.64
CLRN1P58418 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AC022878.1-201ENST00000530684 149 ntBASIC4.81□□□□□ -1.64
CLRN1P58418 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.81□□□□□ -1.64
CLRN1P58418 AC022404.1-201ENST00000555320 273 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms