Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNA5SP135-201ENST00000517019 125 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN20P56880 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.22□□□□□ -1.73
CLDN20P56880 AF279873.1-201ENST00000523393 313 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.22□□□□□ -1.73
CLDN20P56880 OR5AN2P-201ENST00000534535 896 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.22□□□□□ -1.73
CLDN20P56880 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN20P56880 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.22□□□□□ -1.73
CLDN20P56880 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN20P56880 AC009094.1-201ENST00000564443 426 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 AC145350.1-201ENST00000567426 208 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 AL121834.1-201ENST00000572284 509 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.22□□□□□ -1.73
CLDN20P56880 AC104785.1-201ENST00000603220 588 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.22□□□□□ -1.73
CLDN20P56880 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.22□□□□□ -1.73
CLDN20P56880 TUSC7.1-201ENST00000610969 165 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.22□□□□□ -1.73
CLDN20P56880 RN7SL722P-201ENST00000617780 284 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 RN7SL565P-201ENST00000618246 284 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.22□□□□□ -1.73
CLDN20P56880 AC124312.6-202ENST00000623624 418 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 MTND2P41-201ENST00000637599 773 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN20P56880 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.22□□□□□ -1.73
CLDN20P56880 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN20P56880 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN20P56880 AL445487.1-201ENST00000415694 1580 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN20P56880 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CLDN20P56880 PHKBP1-201ENST00000450951 1951 ntBASIC4.22□□□□□ -1.73
CLDN20P56880 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CLDN20P56880 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CLDN20P56880 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.21□□□□□ -1.73
CLDN20P56880 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
CLDN20P56880 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CLDN20P56880 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
CLDN20P56880 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.21□□□□□ -1.74
CLDN20P56880 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CLDN20P56880 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLDN20P56880 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLDN20P56880 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CLDN20P56880 FAM133CP-201ENST00000332869 704 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CLDN20P56880 RNA5SP52-201ENST00000362448 134 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 RN7SKP115-201ENST00000363177 317 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 RNU6-83P-201ENST00000384568 112 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 SNORD65.1-201ENST00000390889 71 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CLDN20P56880 AL049697.2-201ENST00000403708 294 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 RN7SKP267-201ENST00000410381 285 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 AC069213.2-201ENST00000420238 366 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 RPS26P47-201ENST00000427219 348 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.21□□□□□ -1.74
CLDN20P56880 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.21□□□□□ -1.74
CLDN20P56880 AC011753.3-201ENST00000443436 406 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.21□□□□□ -1.74
CLDN20P56880 VN1R40P-201ENST00000455196 941 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 PNPLA4P1-201ENST00000458328 305 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.21□□□□□ -1.74
CLDN20P56880 RPL21P71-201ENST00000465598 459 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 AC090142.1-201ENST00000465776 462 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 UBA52P3-201ENST00000491303 382 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 RPL36AP41-201ENST00000493820 306 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 SNORA3.4-201ENST00000515969 96 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 RNA5SP154-201ENST00000516193 111 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.21□□□□□ -1.74
CLDN20P56880 AC100770.1-201ENST00000532310 322 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.21□□□□□ -1.74
CLDN20P56880 CR383656.6-201ENST00000550518 394 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 MIR4330-201ENST00000579077 105 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 AP005119.2-201ENST00000579735 1105 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 RN7SL690P-201ENST00000582087 240 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.21□□□□□ -1.74
CLDN20P56880 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.21□□□□□ -1.74
CLDN20P56880 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.21□□□□□ -1.74
CLDN20P56880 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.21□□□□□ -1.74
CLDN20P56880 AP000255.1-201ENST00000610276 676 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 MIR6748-201ENST00000610433 71 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 AL136295.6-201ENST00000610486 658 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 AC097478.2-201ENST00000610572 514 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLDN20P56880 AC023158.2-201ENST00000614876 543 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 AC105227.2-201ENST00000615075 605 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 AP003485.2-201ENST00000623636 610 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 AC068057.2-201ENST00000624047 895 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 AC079416.3-201ENST00000624479 549 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.21□□□□□ -1.74
CLDN20P56880 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CLDN20P56880 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLDN20P56880 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CLDN20P56880 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.21□□□□□ -1.74
CLDN20P56880 MFSD8-216ENST00000641147 4009 ntBASIC4.21□□□□□ -1.74
CLDN20P56880 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.21□□□□□ -1.74
CLDN20P56880 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.21□□□□□ -1.74
CLDN20P56880 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLDN20P56880 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.2□□□□□ -1.74
CLDN20P56880 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms