Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNU6-1176P-201ENST00000390955 107 ntBASIC4.26□□□□□ -1.73
PEX3P56589 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PEX3P56589 AL034374.1-201ENST00000406329 351 ntBASIC4.26□□□□□ -1.73
PEX3P56589 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.26□□□□□ -1.73
PEX3P56589 JKAMPP1-201ENST00000413804 919 ntBASIC4.26□□□□□ -1.73
PEX3P56589 TCEA1P4-201ENST00000415066 844 ntBASIC4.26□□□□□ -1.73
PEX3P56589 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.26□□□□□ -1.73
PEX3P56589 AC087650.1-201ENST00000431445 468 ntBASIC4.26□□□□□ -1.73
PEX3P56589 AL512661.1-201ENST00000434586 1253 ntBASIC4.26□□□□□ -1.73
PEX3P56589 AL133244.1-201ENST00000456007 258 ntBASIC4.26□□□□□ -1.73
PEX3P56589 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.26□□□□□ -1.73
PEX3P56589 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.26□□□□□ -1.73
PEX3P56589 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.26□□□□□ -1.73
PEX3P56589 AL139099.1-201ENST00000497398 403 ntBASIC4.26□□□□□ -1.73
PEX3P56589 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.26□□□□□ -1.73
PEX3P56589 AC146944.2-203ENST00000502493 354 ntBASIC4.26□□□□□ -1.73
PEX3P56589 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.26□□□□□ -1.73
PEX3P56589 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.26□□□□□ -1.73
PEX3P56589 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PEX3P56589 AC139495.1-202ENST00000513164 354 ntBASIC4.26□□□□□ -1.73
PEX3P56589 AC018797.3-201ENST00000513388 1241 ntBASIC4.26□□□□□ -1.73
PEX3P56589 MTND4LP31-201ENST00000514859 294 ntBASIC4.26□□□□□ -1.73
PEX3P56589 RNU6-1004P-201ENST00000516584 111 ntBASIC4.26□□□□□ -1.73
PEX3P56589 HIGD1AP18-201ENST00000520730 278 ntBASIC4.26□□□□□ -1.73
PEX3P56589 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.26□□□□□ -1.73
PEX3P56589 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.26□□□□□ -1.73
PEX3P56589 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.26□□□□□ -1.73
PEX3P56589 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.26□□□□□ -1.73
PEX3P56589 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.26□□□□□ -1.73
PEX3P56589 AC090912.3-201ENST00000609775 533 ntBASIC4.26□□□□□ -1.73
PEX3P56589 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.26□□□□□ -1.73
PEX3P56589 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.26□□□□□ -1.73
PEX3P56589 AC015908.5-201ENST00000623289 343 ntBASIC4.26□□□□□ -1.73
PEX3P56589 AC119674.1-212ENST00000641155 993 ntBASIC4.26□□□□□ -1.73
PEX3P56589 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PEX3P56589 AC093311.1-201ENST00000506586 2021 ntBASIC4.26□□□□□ -1.73
PEX3P56589 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.26□□□□□ -1.73
PEX3P56589 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.26□□□□□ -1.73
PEX3P56589 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PEX3P56589 UBE3AP2-201ENST00000429033 2259 ntBASIC4.25□□□□□ -1.73
PEX3P56589 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.25□□□□□ -1.73
PEX3P56589 IPO8P1-201ENST00000455509 3109 ntBASIC4.25□□□□□ -1.73
PEX3P56589 U1.1-201ENST00000384101 164 ntBASIC4.25□□□□□ -1.73
PEX3P56589 RNU6-532P-201ENST00000384318 107 ntBASIC4.25□□□□□ -1.73
PEX3P56589 MIR199A2-201ENST00000385289 110 ntBASIC4.25□□□□□ -1.73
PEX3P56589 ATP5F1P6-201ENST00000402768 767 ntBASIC4.25□□□□□ -1.73
PEX3P56589 SNORA3.3-201ENST00000408712 125 ntBASIC4.25□□□□□ -1.73
PEX3P56589 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.25□□□□□ -1.73
PEX3P56589 AL158050.1-201ENST00000416077 457 ntBASIC4.25□□□□□ -1.73
PEX3P56589 CACYBPP1-201ENST00000438592 684 ntBASIC4.25□□□□□ -1.73
PEX3P56589 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.25□□□□□ -1.73
PEX3P56589 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.25□□□□□ -1.73
PEX3P56589 FTH1P2-201ENST00000466086 412 ntBASIC4.25□□□□□ -1.73
PEX3P56589 SYT14P1-201ENST00000481459 721 ntBASIC4.25□□□□□ -1.73
PEX3P56589 AC139783.2-201ENST00000504847 1145 ntBASIC4.25□□□□□ -1.73
PEX3P56589 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.25□□□□□ -1.73
PEX3P56589 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.25□□□□□ -1.73
PEX3P56589 SCARNA14-201ENST00000516903 136 ntBASIC4.25□□□□□ -1.73
PEX3P56589 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.25□□□□□ -1.73
PEX3P56589 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PEX3P56589 AC022695.1-201ENST00000522089 237 ntBASIC4.25□□□□□ -1.73
PEX3P56589 CYCSP30-201ENST00000546447 172 ntBASIC4.25□□□□□ -1.73
PEX3P56589 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.25□□□□□ -1.73
PEX3P56589 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.25□□□□□ -1.73
PEX3P56589 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.25□□□□□ -1.73
PEX3P56589 AC025918.2-201ENST00000558683 763 ntBASIC4.25□□□□□ -1.73
PEX3P56589 AC107982.3-201ENST00000584957 985 ntBASIC4.25□□□□□ -1.73
PEX3P56589 AC015911.5-201ENST00000587076 451 ntBASIC4.25□□□□□ -1.73
PEX3P56589 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.25□□□□□ -1.73
PEX3P56589 MRPS35P3-201ENST00000603189 709 ntBASIC4.25□□□□□ -1.73
PEX3P56589 AC079880.2-201ENST00000603790 1213 ntBASIC4.25□□□□□ -1.73
PEX3P56589 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.25□□□□□ -1.73
PEX3P56589 AC233309.1-201ENST00000619522 751 ntBASIC4.25□□□□□ -1.73
PEX3P56589 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
PEX3P56589 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
PEX3P56589 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PEX3P56589 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PEX3P56589 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
PEX3P56589 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.24□□□□□ -1.73
PEX3P56589 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PEX3P56589 AC008725.1-201ENST00000605123 2263 ntBASIC4.24□□□□□ -1.73
PEX3P56589 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PEX3P56589 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PEX3P56589 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PEX3P56589 MTCO1P4-201ENST00000520516 1409 ntBASIC4.24□□□□□ -1.73
PEX3P56589 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.24□□□□□ -1.73
PEX3P56589 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PEX3P56589 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PEX3P56589 AC025750.1-201ENST00000399891 379 ntBASIC4.24□□□□□ -1.73
PEX3P56589 RN7SKP222-201ENST00000410651 315 ntBASIC4.24□□□□□ -1.73
PEX3P56589 RNU4-27P-201ENST00000410889 139 ntBASIC4.24□□□□□ -1.73
PEX3P56589 RAC1P3-201ENST00000416129 580 ntBASIC4.24□□□□□ -1.73
PEX3P56589 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.24□□□□□ -1.73
PEX3P56589 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.24□□□□□ -1.73
PEX3P56589 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PEX3P56589 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.24□□□□□ -1.73
PEX3P56589 KCTD10P1-201ENST00000434203 625 ntBASIC4.24□□□□□ -1.73
PEX3P56589 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.24□□□□□ -1.73
PEX3P56589 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.24□□□□□ -1.73
PEX3P56589 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 315 ms