Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 CEACAMP8-201ENST00000413902 580 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AL138785.1-201ENST00000425821 331 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AL031736.2-201ENST00000426573 787 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.73□□□□□ -1.65
HDAC4P56524 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.73□□□□□ -1.65
HDAC4P56524 HMGB1P45-201ENST00000435986 653 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.73□□□□□ -1.65
HDAC4P56524 AC069285.2-201ENST00000440210 275 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 RPL23AP93-201ENST00000440847 484 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.73□□□□□ -1.65
HDAC4P56524 RPS7P5-201ENST00000441482 581 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 VN1R25P-201ENST00000443385 738 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.73□□□□□ -1.65
HDAC4P56524 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.73□□□□□ -1.65
HDAC4P56524 PTGES3P5-201ENST00000455109 434 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.73□□□□□ -1.65
HDAC4P56524 AC021146.5-201ENST00000503544 545 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.73□□□□□ -1.65
HDAC4P56524 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.73□□□□□ -1.65
HDAC4P56524 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.73□□□□□ -1.65
HDAC4P56524 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.73□□□□□ -1.65
HDAC4P56524 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
HDAC4P56524 AP001781.1-201ENST00000530977 207 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.73□□□□□ -1.65
HDAC4P56524 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.73□□□□□ -1.65
HDAC4P56524 MIR4512-201ENST00000583257 77 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AC091178.1-203ENST00000584586 279 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.73□□□□□ -1.65
HDAC4P56524 CCDC58P3-201ENST00000590792 430 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AP001542.2-201ENST00000593141 364 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.73□□□□□ -1.65
HDAC4P56524 GAS5-AS1-201ENST00000602767 694 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AC022022.2-201ENST00000602989 360 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AC093765.1-201ENST00000603758 881 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AC015813.4-201ENST00000610469 179 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HDAC4P56524 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.73□□□□□ -1.65
HDAC4P56524 AC023509.5-201ENST00000617434 807 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AL355493.4-201ENST00000618530 292 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AC010975.3-201ENST00000618727 978 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 VN1R7P-201ENST00000619242 903 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AC011330.2-201ENST00000621680 635 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AP002791.1-201ENST00000623291 381 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.73□□□□□ -1.65
HDAC4P56524 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HDAC4P56524 AC046144.1-201ENST00000478559 1853 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.72□□□□□ -1.65
HDAC4P56524 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDAC4P56524 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HDAC4P56524 RNU1-32P-201ENST00000363937 159 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HDAC4P56524 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HDAC4P56524 RNA5SP372-201ENST00000390836 115 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 SDHCP2-201ENST00000398565 501 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC4P56524 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC4P56524 HIGD1AP15-201ENST00000416198 280 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 AC114814.2-201ENST00000419195 485 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.72□□□□□ -1.65
HDAC4P56524 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC4P56524 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.72□□□□□ -1.65
HDAC4P56524 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.72□□□□□ -1.65
HDAC4P56524 AC234064.1-201ENST00000436312 247 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 AC011753.3-201ENST00000443436 406 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 MTCYBP42-201ENST00000444653 1130 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.72□□□□□ -1.65
HDAC4P56524 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.72□□□□□ -1.65
HDAC4P56524 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 BX248409.1-201ENST00000455497 255 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC4P56524 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.72□□□□□ -1.65
HDAC4P56524 NAP1L1P3-201ENST00000462291 880 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 RPL23AP65-201ENST00000475608 468 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 AC011037.1-201ENST00000483964 558 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC4P56524 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC4P56524 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.72□□□□□ -1.65
HDAC4P56524 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.72□□□□□ -1.65
HDAC4P56524 MYL12AP1-201ENST00000518490 515 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 MRPS36P3-201ENST00000519284 130 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 IGJP1-201ENST00000522682 475 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.72□□□□□ -1.65
HDAC4P56524 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.72□□□□□ -1.65
HDAC4P56524 DEFB130C-202ENST00000530001 230 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.72□□□□□ -1.65
HDAC4P56524 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.72□□□□□ -1.65
HDAC4P56524 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.72□□□□□ -1.65
HDAC4P56524 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.72□□□□□ -1.65
HDAC4P56524 BPIFA4P-203ENST00000603168 689 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 AC008966.2-201ENST00000606157 453 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 AL138478.1-201ENST00000612252 832 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 AC140113.4-201ENST00000622087 222 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.72□□□□□ -1.65
HDAC4P56524 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HDAC4P56524 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HDAC4P56524 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.72□□□□□ -1.65
HDAC4P56524 LINC00622-201ENST00000562811 1570 ntBASIC4.72□□□□□ -1.65
HDAC4P56524 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.72□□□□□ -1.65
HDAC4P56524 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms