Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RPL23AP15-201ENST00000450202 459 ntBASIC5.03□□□□□ -1.6
COPAP53621 RPL5P24-201ENST00000463742 885 ntBASIC5.03□□□□□ -1.6
COPAP53621 AC104689.1-201ENST00000473356 768 ntBASIC5.03□□□□□ -1.6
COPAP53621 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.03□□□□□ -1.6
COPAP53621 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COPAP53621 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.03□□□□□ -1.6
COPAP53621 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.03□□□□□ -1.6
COPAP53621 AC108043.1-201ENST00000512696 574 ntBASIC5.03□□□□□ -1.6
COPAP53621 AC012339.2-201ENST00000523996 453 ntBASIC5.03□□□□□ -1.6
COPAP53621 DYNLL1P4-201ENST00000549314 266 ntBASIC5.03□□□□□ -1.6
COPAP53621 DUXAP1-201ENST00000556632 463 ntBASIC5.03□□□□□ -1.6
COPAP53621 AC011477.5-201ENST00000586571 259 ntBASIC5.03□□□□□ -1.6
COPAP53621 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.03□□□□□ -1.6
COPAP53621 AC020910.3-201ENST00000603701 874 ntBASIC5.03□□□□□ -1.6
COPAP53621 AL031281.1-201ENST00000604049 488 ntBASIC5.03□□□□□ -1.6
COPAP53621 AL451064.1-201ENST00000607718 471 ntBASIC5.03□□□□□ -1.6
COPAP53621 MIR6780A-201ENST00000615089 68 ntBASIC5.03□□□□□ -1.6
COPAP53621 MIR8069-1-201ENST00000616627 86 ntBASIC5.03□□□□□ -1.6
COPAP53621 MIR8069-2-201ENST00000621412 86 ntBASIC5.03□□□□□ -1.6
COPAP53621 AC004943.3-201ENST00000624116 600 ntBASIC5.03□□□□□ -1.6
COPAP53621 MIR4278-201ENST00000636094 69 ntBASIC5.03□□□□□ -1.6
COPAP53621 AC099654.2-201ENST00000433031 1980 ntBASIC5.03□□□□□ -1.6
COPAP53621 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
COPAP53621 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.03□□□□□ -1.6
COPAP53621 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.03□□□□□ -1.6
COPAP53621 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.03□□□□□ -1.6
COPAP53621 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.03□□□□□ -1.6
COPAP53621 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61
COPAP53621 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.02□□□□□ -1.61
COPAP53621 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.02□□□□□ -1.61
COPAP53621 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.02□□□□□ -1.61
COPAP53621 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 AC109315.1-201ENST00000584143 1347 ntBASIC5.02□□□□□ -1.61
COPAP53621 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
COPAP53621 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
COPAP53621 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.02□□□□□ -1.61
COPAP53621 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.02□□□□□ -1.61
COPAP53621 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.02□□□□□ -1.61
COPAP53621 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.02□□□□□ -1.61
COPAP53621 AC016716.1-201ENST00000265882 708 ntBASIC5.02□□□□□ -1.61
COPAP53621 AC079741.1-201ENST00000321498 212 ntBASIC5.02□□□□□ -1.61
COPAP53621 RNU6-1066P-201ENST00000363573 105 ntBASIC5.02□□□□□ -1.61
COPAP53621 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.02□□□□□ -1.61
COPAP53621 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 AL139098.1-201ENST00000407291 389 ntBASIC5.02□□□□□ -1.61
COPAP53621 RN7SKP100-201ENST00000411258 284 ntBASIC5.02□□□□□ -1.61
COPAP53621 PRELID3BP11-201ENST00000414230 479 ntBASIC5.02□□□□□ -1.61
COPAP53621 MTND4P20-201ENST00000424125 869 ntBASIC5.02□□□□□ -1.61
COPAP53621 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.02□□□□□ -1.61
COPAP53621 RPL37P1-201ENST00000432310 284 ntBASIC5.02□□□□□ -1.61
COPAP53621 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.02□□□□□ -1.61
COPAP53621 RAB11AP1-201ENST00000442978 646 ntBASIC5.02□□□□□ -1.61
COPAP53621 RPL7AP61-201ENST00000443410 636 ntBASIC5.02□□□□□ -1.61
COPAP53621 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.02□□□□□ -1.61
COPAP53621 AL034418.1-201ENST00000448675 860 ntBASIC5.02□□□□□ -1.61
COPAP53621 AC073264.2-201ENST00000448886 166 ntBASIC5.02□□□□□ -1.61
COPAP53621 TPT1P13-201ENST00000449760 499 ntBASIC5.02□□□□□ -1.61
COPAP53621 AL356981.1-201ENST00000454879 684 ntBASIC5.02□□□□□ -1.61
COPAP53621 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.02□□□□□ -1.61
COPAP53621 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.02□□□□□ -1.61
COPAP53621 RPF2P2-201ENST00000504693 896 ntBASIC5.02□□□□□ -1.61
COPAP53621 WBP1LP4-201ENST00000505043 344 ntBASIC5.02□□□□□ -1.61
COPAP53621 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.02□□□□□ -1.61
COPAP53621 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.02□□□□□ -1.61
COPAP53621 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.02□□□□□ -1.61
COPAP53621 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.02□□□□□ -1.61
COPAP53621 AC109445.1-201ENST00000512356 383 ntBASIC5.02□□□□□ -1.61
COPAP53621 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.02□□□□□ -1.61
COPAP53621 RNU6-1225P-201ENST00000516336 65 ntBASIC5.02□□□□□ -1.61
COPAP53621 RNA5SP360-201ENST00000516555 118 ntBASIC5.02□□□□□ -1.61
COPAP53621 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.02□□□□□ -1.61
COPAP53621 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.02□□□□□ -1.61
COPAP53621 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.02□□□□□ -1.61
COPAP53621 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.02□□□□□ -1.61
COPAP53621 AL356057.1-201ENST00000533798 831 ntBASIC5.02□□□□□ -1.61
COPAP53621 AP006289.1-201ENST00000538089 277 ntBASIC5.02□□□□□ -1.61
COPAP53621 HIGD1AP17-201ENST00000554576 276 ntBASIC5.02□□□□□ -1.61
COPAP53621 AC008015.1-201ENST00000555505 465 ntBASIC5.02□□□□□ -1.61
COPAP53621 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.02□□□□□ -1.61
COPAP53621 PIGPP4-201ENST00000584447 307 ntBASIC5.02□□□□□ -1.61
COPAP53621 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.02□□□□□ -1.61
COPAP53621 AC008745.1-201ENST00000604064 271 ntBASIC5.02□□□□□ -1.61
COPAP53621 AL450489.1-201ENST00000612071 468 ntBASIC5.02□□□□□ -1.61
COPAP53621 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.02□□□□□ -1.61
COPAP53621 AC069209.1-201ENST00000619282 651 ntBASIC5.02□□□□□ -1.61
COPAP53621 AP000346.3-201ENST00000622821 210 ntBASIC5.02□□□□□ -1.61
COPAP53621 AC000123.2-201ENST00000623124 461 ntBASIC5.02□□□□□ -1.61
COPAP53621 AP000676.3-201ENST00000623299 569 ntBASIC5.02□□□□□ -1.61
COPAP53621 AC068620.4-201ENST00000636730 1182 ntBASIC5.02□□□□□ -1.61
COPAP53621 MIR6715B-201ENST00000637172 77 ntBASIC5.02□□□□□ -1.61
COPAP53621 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COPAP53621 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms