Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
ACLYP53396 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
ACLYP53396 RNU6-532P-201ENST00000384318 107 ntBASIC4.21□□□□□ -1.74
ACLYP53396 MIR490-201ENST00000384865 128 ntBASIC4.21□□□□□ -1.74
ACLYP53396 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.21□□□□□ -1.74
ACLYP53396 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.21□□□□□ -1.74
ACLYP53396 RN7SKP177-201ENST00000410567 355 ntBASIC4.21□□□□□ -1.74
ACLYP53396 RNU6-564P-201ENST00000410983 104 ntBASIC4.21□□□□□ -1.74
ACLYP53396 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.21□□□□□ -1.74
ACLYP53396 BTF3P9-201ENST00000418784 283 ntBASIC4.21□□□□□ -1.74
ACLYP53396 DYNLL1P7-201ENST00000429273 258 ntBASIC4.21□□□□□ -1.74
ACLYP53396 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.21□□□□□ -1.74
ACLYP53396 AC007563.3-201ENST00000433233 371 ntBASIC4.21□□□□□ -1.74
ACLYP53396 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.21□□□□□ -1.74
ACLYP53396 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.21□□□□□ -1.74
ACLYP53396 SNORD105B-201ENST00000458770 79 ntBASIC4.21□□□□□ -1.74
ACLYP53396 AC005912.1-201ENST00000495392 255 ntBASIC4.21□□□□□ -1.74
ACLYP53396 AC021146.7-201ENST00000509604 775 ntBASIC4.21□□□□□ -1.74
ACLYP53396 GMPSP1-201ENST00000514075 579 ntBASIC4.21□□□□□ -1.74
ACLYP53396 RNA5SP154-201ENST00000516193 111 ntBASIC4.21□□□□□ -1.74
ACLYP53396 AC007458.1-201ENST00000542812 373 ntBASIC4.21□□□□□ -1.74
ACLYP53396 AC068446.3-201ENST00000555285 382 ntBASIC4.21□□□□□ -1.74
ACLYP53396 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.21□□□□□ -1.74
ACLYP53396 AC020914.6-201ENST00000594327 272 ntBASIC4.21□□□□□ -1.74
ACLYP53396 AL008729.2-201ENST00000606393 473 ntBASIC4.21□□□□□ -1.74
ACLYP53396 AC015813.4-201ENST00000610469 179 ntBASIC4.21□□□□□ -1.74
ACLYP53396 AC023509.5-201ENST00000617434 807 ntBASIC4.21□□□□□ -1.74
ACLYP53396 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.21□□□□□ -1.74
ACLYP53396 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.21□□□□□ -1.74
ACLYP53396 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
ACLYP53396 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ACLYP53396 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
ACLYP53396 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.21□□□□□ -1.74
ACLYP53396 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
ACLYP53396 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ACLYP53396 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ACLYP53396 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.2□□□□□ -1.74
ACLYP53396 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ACLYP53396 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ACLYP53396 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ACLYP53396 Y_RNA.111-201ENST00000363248 100 ntBASIC4.2□□□□□ -1.74
ACLYP53396 MIR634-201ENST00000385208 97 ntBASIC4.2□□□□□ -1.74
ACLYP53396 GSTA12P-201ENST00000402398 508 ntBASIC4.2□□□□□ -1.74
ACLYP53396 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ACLYP53396 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.2□□□□□ -1.74
ACLYP53396 AC073063.1-201ENST00000434352 607 ntBASIC4.2□□□□□ -1.74
ACLYP53396 MAPRE1P3-201ENST00000435438 796 ntBASIC4.2□□□□□ -1.74
ACLYP53396 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.2□□□□□ -1.74
ACLYP53396 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.2□□□□□ -1.74
ACLYP53396 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ACLYP53396 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.2□□□□□ -1.74
ACLYP53396 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.2□□□□□ -1.74
ACLYP53396 OR4V1P-201ENST00000525394 1140 ntBASIC4.2□□□□□ -1.74
ACLYP53396 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.2□□□□□ -1.74
ACLYP53396 AC010591.1-201ENST00000603941 649 ntBASIC4.2□□□□□ -1.74
ACLYP53396 AL354760.1-201ENST00000608357 643 ntBASIC4.2□□□□□ -1.74
ACLYP53396 MIR7154-201ENST00000620673 73 ntBASIC4.2□□□□□ -1.74
ACLYP53396 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.2□□□□□ -1.74
ACLYP53396 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ACLYP53396 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ACLYP53396 MTND4P26-201ENST00000415971 1359 ntBASIC4.19□□□□□ -1.74
ACLYP53396 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ACLYP53396 RNA5SP50-201ENST00000363731 107 ntBASIC4.19□□□□□ -1.74
ACLYP53396 RNU6-819P-201ENST00000364116 107 ntBASIC4.19□□□□□ -1.74
ACLYP53396 AC234772.1-201ENST00000377927 937 ntBASIC4.19□□□□□ -1.74
ACLYP53396 RNU6-146P-201ENST00000384602 108 ntBASIC4.19□□□□□ -1.74
ACLYP53396 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
ACLYP53396 RNA5SP104-201ENST00000410989 118 ntBASIC4.19□□□□□ -1.74
ACLYP53396 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.19□□□□□ -1.74
ACLYP53396 AL391219.1-201ENST00000422570 483 ntBASIC4.19□□□□□ -1.74
ACLYP53396 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.19□□□□□ -1.74
ACLYP53396 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.19□□□□□ -1.74
ACLYP53396 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.19□□□□□ -1.74
ACLYP53396 AC092641.1-201ENST00000440229 772 ntBASIC4.19□□□□□ -1.74
ACLYP53396 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.19□□□□□ -1.74
ACLYP53396 SNORA59A-201ENST00000459326 152 ntBASIC4.19□□□□□ -1.74
ACLYP53396 RN7SL585P-201ENST00000470538 280 ntBASIC4.19□□□□□ -1.74
ACLYP53396 RPL32P34-201ENST00000486380 400 ntBASIC4.19□□□□□ -1.74
ACLYP53396 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.19□□□□□ -1.74
ACLYP53396 SNORA70.17-201ENST00000516449 133 ntBASIC4.19□□□□□ -1.74
ACLYP53396 IGKV2-38-201ENST00000517443 247 ntBASIC4.19□□□□□ -1.74
ACLYP53396 AF186190.1-201ENST00000517470 480 ntBASIC4.19□□□□□ -1.74
ACLYP53396 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.19□□□□□ -1.74
ACLYP53396 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.19□□□□□ -1.74
ACLYP53396 AC069240.1-201ENST00000548774 375 ntBASIC4.19□□□□□ -1.74
ACLYP53396 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.19□□□□□ -1.74
ACLYP53396 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.19□□□□□ -1.74
ACLYP53396 PSMA6P4-201ENST00000603247 718 ntBASIC4.19□□□□□ -1.74
ACLYP53396 BNIP3P11-201ENST00000603878 563 ntBASIC4.19□□□□□ -1.74
ACLYP53396 AC090953.1-201ENST00000604305 1092 ntBASIC4.19□□□□□ -1.74
ACLYP53396 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.19□□□□□ -1.74
ACLYP53396 AL158196.1-201ENST00000616786 434 ntBASIC4.19□□□□□ -1.74
ACLYP53396 AC095038.2-201ENST00000621464 1070 ntBASIC4.19□□□□□ -1.74
ACLYP53396 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.19□□□□□ -1.74
ACLYP53396 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.19□□□□□ -1.74
ACLYP53396 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.19□□□□□ -1.74
ACLYP53396 AL773545.4-201ENST00000637262 310 ntBASIC4.19□□□□□ -1.74
ACLYP53396 AL513478.4-201ENST00000641636 310 ntBASIC4.19□□□□□ -1.74
ACLYP53396 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
ACLYP53396 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms