Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
GTF2A1P52655 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.57□□□□□ -1.84
GTF2A1P52655 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.57□□□□□ -1.84
GTF2A1P52655 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
GTF2A1P52655 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
GTF2A1P52655 U3.11-201ENST00000364476 212 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GTF2A1P52655 SNORA70E-201ENST00000384492 135 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
GTF2A1P52655 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 AC007899.1-201ENST00000412776 775 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GTF2A1P52655 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.57□□□□□ -1.84
GTF2A1P52655 MTND5P19-201ENST00000424872 1794 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 ACTR3P2-201ENST00000439585 1257 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC3.57□□□□□ -1.84
GTF2A1P52655 HMGN2P21-201ENST00000447764 270 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.57□□□□□ -1.84
GTF2A1P52655 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.57□□□□□ -1.84
GTF2A1P52655 RPL35P6-201ENST00000490024 372 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 AC093278.1-201ENST00000494700 600 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.57□□□□□ -1.84
GTF2A1P52655 AC108078.3-201ENST00000502633 489 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 HAUS1P1-201ENST00000505275 832 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.57□□□□□ -1.84
GTF2A1P52655 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.57□□□□□ -1.84
GTF2A1P52655 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GTF2A1P52655 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.57□□□□□ -1.84
GTF2A1P52655 RARSP1-201ENST00000542842 1418 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 MIR4474-201ENST00000579189 78 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.57□□□□□ -1.84
GTF2A1P52655 MIR3138-201ENST00000585238 82 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 AC002546.1-201ENST00000588041 2504 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GTF2A1P52655 AC006557.5-201ENST00000603126 811 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.57□□□□□ -1.84
GTF2A1P52655 AC090948.1-201ENST00000607464 549 ntBASIC3.57□□□□□ -1.84
GTF2A1P52655 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GTF2A1P52655 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.57□□□□□ -1.84
GTF2A1P52655 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.57□□□□□ -1.84
GTF2A1P52655 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.57□□□□□ -1.84
GTF2A1P52655 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
GTF2A1P52655 AC116667.1-201ENST00000604855 2072 ntBASIC3.56□□□□□ -1.84
GTF2A1P52655 AC093831.2-201ENST00000624393 3427 ntBASIC3.56□□□□□ -1.84
GTF2A1P52655 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GTF2A1P52655 RNA5SP189-201ENST00000364920 115 ntBASIC3.56□□□□□ -1.84
GTF2A1P52655 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC3.56□□□□□ -1.84
GTF2A1P52655 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
GTF2A1P52655 MT-RNR1-201ENST00000389680 954 ntBASIC3.56□□□□□ -1.84
GTF2A1P52655 SNORA11.3-201ENST00000408471 128 ntBASIC3.56□□□□□ -1.84
GTF2A1P52655 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.56□□□□□ -1.84
GTF2A1P52655 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.56□□□□□ -1.84
GTF2A1P52655 AC069213.2-201ENST00000420238 366 ntBASIC3.56□□□□□ -1.84
GTF2A1P52655 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.56□□□□□ -1.84
GTF2A1P52655 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.56□□□□□ -1.84
GTF2A1P52655 AL390023.1-201ENST00000428836 262 ntBASIC3.56□□□□□ -1.84
GTF2A1P52655 RPL21P2-201ENST00000440049 481 ntBASIC3.56□□□□□ -1.84
GTF2A1P52655 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.56□□□□□ -1.84
GTF2A1P52655 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.56□□□□□ -1.84
GTF2A1P52655 AC073264.2-201ENST00000448886 166 ntBASIC3.56□□□□□ -1.84
GTF2A1P52655 RPS27AP1-201ENST00000475545 471 ntBASIC3.56□□□□□ -1.84
GTF2A1P52655 RPL29P14-201ENST00000495837 428 ntBASIC3.56□□□□□ -1.84
GTF2A1P52655 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.56□□□□□ -1.84
GTF2A1P52655 MIR2276-201ENST00000516886 89 ntBASIC3.56□□□□□ -1.84
GTF2A1P52655 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.56□□□□□ -1.84
GTF2A1P52655 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.56□□□□□ -1.84
GTF2A1P52655 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.56□□□□□ -1.84
GTF2A1P52655 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.56□□□□□ -1.84
GTF2A1P52655 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.56□□□□□ -1.84
GTF2A1P52655 MIR6780A-201ENST00000615089 68 ntBASIC3.56□□□□□ -1.84
GTF2A1P52655 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.56□□□□□ -1.84
GTF2A1P52655 SNORA11.6-201ENST00000619030 128 ntBASIC3.56□□□□□ -1.84
GTF2A1P52655 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GTF2A1P52655 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.56□□□□□ -1.84
GTF2A1P52655 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
GTF2A1P52655 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
GTF2A1P52655 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.55□□□□□ -1.84
GTF2A1P52655 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
GTF2A1P52655 MIR129-1-201ENST00000384972 72 ntBASIC3.55□□□□□ -1.84
GTF2A1P52655 RPL31P52-201ENST00000407532 367 ntBASIC3.55□□□□□ -1.84
GTF2A1P52655 RN7SKP182-201ENST00000410772 298 ntBASIC3.55□□□□□ -1.84
GTF2A1P52655 RANP4-201ENST00000413361 655 ntBASIC3.55□□□□□ -1.84
GTF2A1P52655 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.55□□□□□ -1.84
GTF2A1P52655 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.55□□□□□ -1.84
GTF2A1P52655 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.55□□□□□ -1.84
GTF2A1P52655 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.55□□□□□ -1.84
GTF2A1P52655 CCRL1P1-201ENST00000449542 1053 ntBASIC3.55□□□□□ -1.84
GTF2A1P52655 AC093392.2-201ENST00000450682 337 ntBASIC3.55□□□□□ -1.84
GTF2A1P52655 RN7SL177P-201ENST00000476596 299 ntBASIC3.55□□□□□ -1.84
GTF2A1P52655 RN7SL810P-201ENST00000493031 276 ntBASIC3.55□□□□□ -1.84
GTF2A1P52655 AC008958.1-201ENST00000511047 682 ntBASIC3.55□□□□□ -1.84
GTF2A1P52655 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.55□□□□□ -1.84
GTF2A1P52655 TVP23BP1-201ENST00000557500 617 ntBASIC3.55□□□□□ -1.84
GTF2A1P52655 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.55□□□□□ -1.84
GTF2A1P52655 MTND2P13-201ENST00000577438 1039 ntBASIC3.55□□□□□ -1.84
GTF2A1P52655 MIR4480-201ENST00000582492 71 ntBASIC3.55□□□□□ -1.84
GTF2A1P52655 AC093765.1-201ENST00000603758 881 ntBASIC3.55□□□□□ -1.84
GTF2A1P52655 AC018754.1-201ENST00000607486 925 ntBASIC3.55□□□□□ -1.84
GTF2A1P52655 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.55□□□□□ -1.84
GTF2A1P52655 AL139254.3-201ENST00000641097 674 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms