Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC008127.2-201ENST00000549925 1075 ntBASIC5.08□□□□□ -1.6
NEK3P51956 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NEK3P51956 NDUFB4P11-201ENST00000560510 395 ntBASIC5.08□□□□□ -1.6
NEK3P51956 DPRXP4-201ENST00000578053 568 ntBASIC5.08□□□□□ -1.6
NEK3P51956 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.08□□□□□ -1.6
NEK3P51956 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.08□□□□□ -1.6
NEK3P51956 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.08□□□□□ -1.6
NEK3P51956 Z99289.3-201ENST00000605586 594 ntBASIC5.08□□□□□ -1.6
NEK3P51956 AL159169.3-201ENST00000608871 561 ntBASIC5.08□□□□□ -1.6
NEK3P51956 AC131235.4-201ENST00000609288 620 ntBASIC5.08□□□□□ -1.6
NEK3P51956 AC078899.5-201ENST00000612475 178 ntBASIC5.08□□□□□ -1.6
NEK3P51956 MIR8069-1-201ENST00000616627 86 ntBASIC5.08□□□□□ -1.6
NEK3P51956 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.08□□□□□ -1.6
NEK3P51956 AP000484.1-201ENST00000620067 1252 ntBASIC5.08□□□□□ -1.6
NEK3P51956 MIR8069-2-201ENST00000621412 86 ntBASIC5.08□□□□□ -1.6
NEK3P51956 AP002791.1-201ENST00000623291 381 ntBASIC5.08□□□□□ -1.6
NEK3P51956 MIR6715B-201ENST00000637172 77 ntBASIC5.08□□□□□ -1.6
NEK3P51956 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
NEK3P51956 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
NEK3P51956 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
NEK3P51956 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.08□□□□□ -1.6
NEK3P51956 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.08□□□□□ -1.6
NEK3P51956 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NEK3P51956 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEK3P51956 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
NEK3P51956 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
NEK3P51956 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NEK3P51956 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.07□□□□□ -1.6
NEK3P51956 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
NEK3P51956 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
NEK3P51956 AC074029.4-201ENST00000624796 1859 ntBASIC5.07□□□□□ -1.6
NEK3P51956 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NEK3P51956 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NEK3P51956 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NEK3P51956 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NEK3P51956 RNU6-1214P-201ENST00000363650 109 ntBASIC5.07□□□□□ -1.6
NEK3P51956 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.07□□□□□ -1.6
NEK3P51956 Y_RNA.408-201ENST00000383987 102 ntBASIC5.07□□□□□ -1.6
NEK3P51956 RNU6-356P-201ENST00000384140 107 ntBASIC5.07□□□□□ -1.6
NEK3P51956 SNORA51.6-201ENST00000384151 125 ntBASIC5.07□□□□□ -1.6
NEK3P51956 RNU5A-2P-201ENST00000384337 116 ntBASIC5.07□□□□□ -1.6
NEK3P51956 MTND4P13-201ENST00000402078 1023 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AL024474.1-201ENST00000404655 591 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AL080315.1-201ENST00000406055 466 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AC068533.2-201ENST00000411872 306 ntBASIC5.07□□□□□ -1.6
NEK3P51956 OR8G2P-201ENST00000412796 908 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AC005005.2-201ENST00000420779 380 ntBASIC5.07□□□□□ -1.6
NEK3P51956 RPL7P53-201ENST00000421245 739 ntBASIC5.07□□□□□ -1.6
NEK3P51956 OR2AM1P-201ENST00000422137 422 ntBASIC5.07□□□□□ -1.6
NEK3P51956 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NEK3P51956 AC104837.2-201ENST00000427236 424 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AC006466.1-201ENST00000438721 289 ntBASIC5.07□□□□□ -1.6
NEK3P51956 MTCYBP31-201ENST00000438855 1122 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.07□□□□□ -1.6
NEK3P51956 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.07□□□□□ -1.6
NEK3P51956 PPIAP3-201ENST00000450588 505 ntBASIC5.07□□□□□ -1.6
NEK3P51956 GYG1P1-201ENST00000460864 698 ntBASIC5.07□□□□□ -1.6
NEK3P51956 RN7SL319P-201ENST00000480656 221 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AC083982.1-201ENST00000485679 344 ntBASIC5.07□□□□□ -1.6
NEK3P51956 NIP7P2-201ENST00000485801 544 ntBASIC5.07□□□□□ -1.6
NEK3P51956 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.07□□□□□ -1.6
NEK3P51956 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.07□□□□□ -1.6
NEK3P51956 AC104090.1-201ENST00000506341 1171 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.07□□□□□ -1.6
NEK3P51956 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.07□□□□□ -1.6
NEK3P51956 RNA5SP249-201ENST00000516127 99 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.07□□□□□ -1.6
NEK3P51956 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC5.07□□□□□ -1.6
NEK3P51956 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.07□□□□□ -1.6
NEK3P51956 AP001636.2-201ENST00000525517 696 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AC023538.1-201ENST00000534576 736 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AC008033.2-201ENST00000542626 177 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.07□□□□□ -1.6
NEK3P51956 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.07□□□□□ -1.6
NEK3P51956 AC002400.1-201ENST00000569310 726 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.07□□□□□ -1.6
NEK3P51956 LLPHP1-201ENST00000603571 367 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.07□□□□□ -1.6
NEK3P51956 AC008083.4-201ENST00000615076 444 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AC092184.1-201ENST00000625042 715 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AC116618.1-201ENST00000634617 774 ntBASIC5.07□□□□□ -1.6
NEK3P51956 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NEK3P51956 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
NEK3P51956 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NEK3P51956 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NEK3P51956 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
NEK3P51956 MTCO1P24-201ENST00000515438 1558 ntBASIC5.07□□□□□ -1.6
NEK3P51956 AC007390.2-201ENST00000606229 3803 ntBASIC5.07□□□□□ -1.6
NEK3P51956 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
NEK3P51956 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.06□□□□□ -1.6
NEK3P51956 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NEK3P51956 AC104454.1-201ENST00000421341 1401 ntBASIC5.06□□□□□ -1.6
NEK3P51956 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
NEK3P51956 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NEK3P51956 IQCB2P-201ENST00000401788 1633 ntBASIC5.06□□□□□ -1.6
NEK3P51956 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.06□□□□□ -1.6
NEK3P51956 AC103591.2-201ENST00000265259 766 ntBASIC5.06□□□□□ -1.6
NEK3P51956 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NEK3P51956 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.06□□□□□ -1.6
NEK3P51956 MIR153-1-201ENST00000384914 90 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms