Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 GSTA9P-201ENST00000406231 611 ntBASIC6.37□□□□□ -1.39
LIG1P18858 RPS3AP2-201ENST00000407190 754 ntBASIC6.37□□□□□ -1.39
LIG1P18858 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.37□□□□□ -1.39
LIG1P18858 AC109780.2-201ENST00000413467 845 ntBASIC6.37□□□□□ -1.39
LIG1P18858 AC069157.1-201ENST00000421749 137 ntBASIC6.37□□□□□ -1.39
LIG1P18858 NPM1P22-201ENST00000427761 952 ntBASIC6.37□□□□□ -1.39
LIG1P18858 ELOCP14-201ENST00000428070 331 ntBASIC6.37□□□□□ -1.39
LIG1P18858 AC073464.1-201ENST00000429823 534 ntBASIC6.37□□□□□ -1.39
LIG1P18858 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.37□□□□□ -1.39
LIG1P18858 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
LIG1P18858 MTCYBP45-201ENST00000435243 565 ntBASIC6.37□□□□□ -1.39
LIG1P18858 SUMO2P3-201ENST00000438311 288 ntBASIC6.37□□□□□ -1.39
LIG1P18858 ELOCP7-201ENST00000439968 331 ntBASIC6.37□□□□□ -1.39
LIG1P18858 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.37□□□□□ -1.39
LIG1P18858 AC064862.4-201ENST00000442180 334 ntBASIC6.37□□□□□ -1.39
LIG1P18858 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.37□□□□□ -1.39
LIG1P18858 HMGN1P36-201ENST00000446623 298 ntBASIC6.37□□□□□ -1.39
LIG1P18858 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.37□□□□□ -1.39
LIG1P18858 AC108463.1-201ENST00000450258 347 ntBASIC6.37□□□□□ -1.39
LIG1P18858 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.37□□□□□ -1.39
LIG1P18858 VDAC2P4-201ENST00000452925 711 ntBASIC6.37□□□□□ -1.39
LIG1P18858 RPS23P6-201ENST00000466136 431 ntBASIC6.37□□□□□ -1.39
LIG1P18858 HMGN1P10-201ENST00000474557 553 ntBASIC6.37□□□□□ -1.39
LIG1P18858 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.37□□□□□ -1.39
LIG1P18858 RBM43P1-201ENST00000476891 1081 ntBASIC6.37□□□□□ -1.39
LIG1P18858 PPIAP19-201ENST00000486414 492 ntBASIC6.37□□□□□ -1.39
LIG1P18858 RNF138P1-201ENST00000502765 546 ntBASIC6.37□□□□□ -1.39
LIG1P18858 NDUFB4P2-201ENST00000509515 391 ntBASIC6.37□□□□□ -1.39
LIG1P18858 AC091912.1-201ENST00000511351 248 ntBASIC6.37□□□□□ -1.39
LIG1P18858 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.37□□□□□ -1.39
LIG1P18858 AC021678.3-201ENST00000517893 476 ntBASIC6.37□□□□□ -1.39
LIG1P18858 AC138832.1-201ENST00000522871 556 ntBASIC6.37□□□□□ -1.39
LIG1P18858 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.37□□□□□ -1.39
LIG1P18858 AK6P1-201ENST00000540219 478 ntBASIC6.37□□□□□ -1.39
LIG1P18858 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.37□□□□□ -1.39
LIG1P18858 AC123904.3-201ENST00000547218 814 ntBASIC6.37□□□□□ -1.39
LIG1P18858 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.37□□□□□ -1.39
LIG1P18858 AL157687.1-201ENST00000554853 619 ntBASIC6.37□□□□□ -1.39
LIG1P18858 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.37□□□□□ -1.39
LIG1P18858 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.37□□□□□ -1.39
LIG1P18858 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.37□□□□□ -1.39
LIG1P18858 AC137800.2-201ENST00000574375 120 ntBASIC6.37□□□□□ -1.39
LIG1P18858 AC012146.2-201ENST00000576545 416 ntBASIC6.37□□□□□ -1.39
LIG1P18858 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC6.37□□□□□ -1.39
LIG1P18858 AC060780.3-201ENST00000589464 80 ntBASIC6.37□□□□□ -1.39
LIG1P18858 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.37□□□□□ -1.39
LIG1P18858 AP004247.3-201ENST00000608682 624 ntBASIC6.37□□□□□ -1.39
LIG1P18858 AL020991.1-201ENST00000612314 373 ntBASIC6.37□□□□□ -1.39
LIG1P18858 MIR6729-201ENST00000618194 65 ntBASIC6.37□□□□□ -1.39
LIG1P18858 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.37□□□□□ -1.39
LIG1P18858 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.37□□□□□ -1.39
LIG1P18858 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
LIG1P18858 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIG1P18858 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LIG1P18858 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.37□□□□□ -1.39
LIG1P18858 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LIG1P18858 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
LIG1P18858 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LIG1P18858 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
LIG1P18858 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
LIG1P18858 AL157700.1-201ENST00000561973 1432 ntBASIC6.36□□□□□ -1.39
LIG1P18858 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
LIG1P18858 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
LIG1P18858 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
LIG1P18858 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
LIG1P18858 SNORA64.1-201ENST00000362600 132 ntBASIC6.36□□□□□ -1.39
LIG1P18858 RNU6-462P-201ENST00000362659 105 ntBASIC6.36□□□□□ -1.39
LIG1P18858 Y_RNA.89-201ENST00000363031 102 ntBASIC6.36□□□□□ -1.39
LIG1P18858 RNA5SP394-201ENST00000364216 119 ntBASIC6.36□□□□□ -1.39
LIG1P18858 AC025750.1-201ENST00000399891 379 ntBASIC6.36□□□□□ -1.39
LIG1P18858 RPS24P12-201ENST00000402084 394 ntBASIC6.36□□□□□ -1.39
LIG1P18858 RPS20P15-201ENST00000412792 311 ntBASIC6.36□□□□□ -1.39
LIG1P18858 HMGB1P11-201ENST00000413899 637 ntBASIC6.36□□□□□ -1.39
LIG1P18858 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG1P18858 AC005033.1-201ENST00000428904 813 ntBASIC6.36□□□□□ -1.39
LIG1P18858 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG1P18858 RPL37P21-201ENST00000435890 276 ntBASIC6.36□□□□□ -1.39
LIG1P18858 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG1P18858 AL391987.1-201ENST00000441025 200 ntBASIC6.36□□□□□ -1.39
LIG1P18858 MTND5P14-201ENST00000441481 1267 ntBASIC6.36□□□□□ -1.39
LIG1P18858 EEF1B2P6-201ENST00000445713 673 ntBASIC6.36□□□□□ -1.39
LIG1P18858 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.36□□□□□ -1.39
LIG1P18858 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC6.36□□□□□ -1.39
LIG1P18858 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG1P18858 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.36□□□□□ -1.39
LIG1P18858 NXT1P1-201ENST00000458481 316 ntBASIC6.36□□□□□ -1.39
LIG1P18858 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
LIG1P18858 AC074386.1-201ENST00000476560 767 ntBASIC6.36□□□□□ -1.39
LIG1P18858 RN7SL809P-201ENST00000482040 297 ntBASIC6.36□□□□□ -1.39
LIG1P18858 ATP5LP5-201ENST00000483050 299 ntBASIC6.36□□□□□ -1.39
LIG1P18858 HMGN1P12-201ENST00000499125 195 ntBASIC6.36□□□□□ -1.39
LIG1P18858 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.36□□□□□ -1.39
LIG1P18858 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.36□□□□□ -1.39
LIG1P18858 CYCSP22-201ENST00000517555 339 ntBASIC6.36□□□□□ -1.39
LIG1P18858 IGKV3D-34-201ENST00000522638 302 ntBASIC6.36□□□□□ -1.39
LIG1P18858 CENPUP1-201ENST00000526649 1202 ntBASIC6.36□□□□□ -1.39
LIG1P18858 AL133457.1-201ENST00000564251 987 ntBASIC6.36□□□□□ -1.39
LIG1P18858 AC138915.2-201ENST00000569776 97 ntBASIC6.36□□□□□ -1.39
LIG1P18858 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC6.36□□□□□ -1.39
LIG1P18858 MIR4260-201ENST00000583107 67 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms