| PTPN2 | P17706 | CCL14-203 | ENST00000620991 | 426 nt | TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC015804.1-201 | ENST00000622935 | 435 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AP000676.4-201 | ENST00000624659 | 623 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC006065.6-201 | ENST00000625201 | 545 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC017104.5-201 | ENST00000637647 | 639 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | UGT2B4-207 | ENST00000639621 | 1154 nt | TSL 5 BASIC | 4.74 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | OR6C3-203 | ENST00000641740 | 1093 nt | APPRIS P1 BASIC | 4.74 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | CMYA5-201 | ENST00000446378 | 12847 nt | APPRIS P1 TSL 5 BASIC | 4.74 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | MTND4P10-201 | ENST00000446199 | 1363 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | MTCO1P6-201 | ENST00000481192 | 1384 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | USP9YP4-201 | ENST00000424401 | 1745 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | DLX6-AS1-201 | ENST00000430027 | 15364 nt | TSL 2 BASIC | 4.74 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC068254.2-201 | ENST00000623938 | 3577 nt | BASIC | 4.74 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | GABRA2-211 | ENST00000514090 | 3401 nt | APPRIS P1 TSL 5 BASIC | 4.74 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | RNF180-202 | ENST00000389100 | 4906 nt | APPRIS P1 TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC138393.1-206 | ENST00000540997 | 1886 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | POU2F1-212 | ENST00000541643 | 13937 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | OR5A1-202 | ENST00000641045 | 8612 nt | APPRIS P1 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | PDE10A-201 | ENST00000366882 | 8233 nt | APPRIS P3 TSL 5 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | SYTL2-217 | ENST00000528231 | 3536 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC079062.1-203 | ENST00000581862 | 3610 nt | TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | CCDC158-202 | ENST00000434846 | 1728 nt | TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | RDH10-AS1-201 | ENST00000514599 | 3261 nt | TSL 2 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | SNORA57.1-201 | ENST00000391227 | 145 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | RPL31-204 | ENST00000409038 | 817 nt | TSL 2 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | RNU6-77P-201 | ENST00000410554 | 91 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | RN7SKP263-201 | ENST00000411194 | 309 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC073071.1-201 | ENST00000412410 | 388 nt | TSL 3 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | DYDC1-203 | ENST00000421924 | 708 nt | APPRIS P1 TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | RAC1P8-201 | ENST00000427086 | 527 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | LINC00458-202 | ENST00000427299 | 1030 nt | TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | LINC01867-201 | ENST00000435357 | 604 nt | TSL 2 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | UBE2V1P5-201 | ENST00000440070 | 405 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | CR769776.1-201 | ENST00000441254 | 787 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | ARL4AP3-201 | ENST00000441452 | 574 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | RPS7P5-201 | ENST00000441482 | 581 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL589880.1-201 | ENST00000448271 | 287 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | GSTA9P-202 | ENST00000448991 | 521 nt | TSL 3 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL008723.1-201 | ENST00000452181 | 590 nt | TSL 5 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | HMGB3P21-201 | ENST00000452483 | 547 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC005410.1-202 | ENST00000460347 | 485 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC073522.1-201 | ENST00000483312 | 377 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC105137.1-201 | ENST00000484355 | 562 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC091167.1-201 | ENST00000492017 | 396 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC010273.1-201 | ENST00000504129 | 946 nt | TSL 5 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL159163.1-201 | ENST00000507747 | 600 nt | APPRIS P1 TSL 5 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | STMN1P2-201 | ENST00000508435 | 439 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC093831.1-201 | ENST00000509166 | 434 nt | TSL 3 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC112673.1-201 | ENST00000513168 | 575 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | MTCO1P35-201 | ENST00000515270 | 228 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC025437.2-201 | ENST00000518103 | 548 nt | TSL 4 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC090819.1-201 | ENST00000523800 | 1111 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | OSGEPL1-AS1-203 | ENST00000523895 | 567 nt | TSL 4 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | ZFPM2-AS1-207 | ENST00000524045 | 987 nt | TSL 3 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | OPRM1-223 | ENST00000524163 | 1251 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AP000756.1-201 | ENST00000532606 | 679 nt | TSL 2 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | CYCSP29-201 | ENST00000533731 | 318 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC055720.2-201 | ENST00000537724 | 172 nt | TSL 3 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC019209.2-201 | ENST00000545704 | 373 nt | TSL 3 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | MTND3P12-201 | ENST00000559068 | 328 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | FAM96A-206 | ENST00000559950 | 561 nt | TSL 2 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC009101.2-201 | ENST00000564293 | 456 nt | TSL 3 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | MMP2-AS1-202 | ENST00000569037 | 553 nt | TSL 5 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC090844.2-203 | ENST00000582263 | 632 nt | TSL 5 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC113368.1-201 | ENST00000603736 | 382 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AL392112.1-201 | ENST00000605115 | 829 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | SNX18P1Y-201 | ENST00000616231 | 511 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC011330.2-201 | ENST00000621680 | 635 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | UGP2-231 | ENST00000627474 | 264 nt | TSL 5 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | GMFB-210 | ENST00000628554 | 639 nt | TSL 4 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | TATDN1-221 | ENST00000630259 | 915 nt | TSL 5 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC097655.1-201 | ENST00000635075 | 318 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC005261.4-201 | ENST00000600047 | 1385 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | SOCS5-201 | ENST00000306503 | 4771 nt | APPRIS P1 TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | POSTN-210 | ENST00000541481 | 3113 nt | TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC006042.3-201 | ENST00000454684 | 1469 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | PCDH15-209 | ENST00000395433 | 6942 nt | TSL 5 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | MTUS1-203 | ENST00000381861 | 3996 nt | APPRIS P4 TSL 2 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | PLCB4-204 | ENST00000378501 | 5833 nt | APPRIS P4 TSL 5 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | OR4S2-202 | ENST00000641692 | 2211 nt | APPRIS P1 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | SLC9C1-201 | ENST00000305815 | 4172 nt | APPRIS P3 TSL 2 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | PRG4-202 | ENST00000367483 | 4921 nt | TSL 5 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | PRKACB-208 | ENST00000394839 | 4200 nt | TSL 2 BASIC | 4.73 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | USP50-205 | ENST00000616326 | 1419 nt | APPRIS ALT2 TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | CASC19-206 | ENST00000641028 | 1430 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | UBA6-AS1-203 | ENST00000500538 | 3352 nt | TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | FILIP1L-209 | ENST00000487087 | 2321 nt | TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | OR5P1P-201 | ENST00000299512 | 925 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | PPIL4-202 | ENST00000340881 | 1089 nt | TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | MT-ND2-201 | ENST00000361453 | 1042 nt | APPRIS P1 BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | RNU1-130P-201 | ENST00000363930 | 160 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | RNU4-51P-201 | ENST00000364206 | 140 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | OR52E6-202 | ENST00000379946 | 954 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | MIR513B-201 | ENST00000385136 | 84 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | MIR708-201 | ENST00000390708 | 88 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AF228730.1-201 | ENST00000397972 | 663 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC118345.1-201 | ENST00000411785 | 366 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | AC008154.2-201 | ENST00000420268 | 414 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | MOB1AP1-201 | ENST00000430903 | 535 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| PTPN2 | P17706 | EEF1A1P39-201 | ENST00000440791 | 250 nt | BASIC | 4.72 | □□□□□ -1.65 | | |