Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.83□□□□□ -1.48
CFTRP13569 EIF1P6-201ENST00000600054 334 ntBASIC5.83□□□□□ -1.48
CFTRP13569 AC006557.5-201ENST00000603126 811 ntBASIC5.83□□□□□ -1.48
CFTRP13569 AP003392.5-201ENST00000607857 415 ntBASIC5.83□□□□□ -1.48
CFTRP13569 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.83□□□□□ -1.48
CFTRP13569 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.83□□□□□ -1.48
CFTRP13569 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.83□□□□□ -1.48
CFTRP13569 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CFTRP13569 AC092111.2-201ENST00000611627 1414 ntBASIC5.82□□□□□ -1.48
CFTRP13569 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CFTRP13569 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CFTRP13569 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CFTRP13569 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CFTRP13569 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.82□□□□□ -1.48
CFTRP13569 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
CFTRP13569 RPL21P109-201ENST00000422213 475 ntBASIC5.82□□□□□ -1.48
CFTRP13569 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.82□□□□□ -1.48
CFTRP13569 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.82□□□□□ -1.48
CFTRP13569 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.82□□□□□ -1.48
CFTRP13569 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.82□□□□□ -1.48
CFTRP13569 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.82□□□□□ -1.48
CFTRP13569 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.82□□□□□ -1.48
CFTRP13569 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CFTRP13569 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
CFTRP13569 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CFTRP13569 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CFTRP13569 AC011503.2-201ENST00000594230 1500 ntBASIC5.81□□□□□ -1.48
CFTRP13569 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CFTRP13569 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CFTRP13569 AL138885.1-201ENST00000405921 675 ntBASIC5.81□□□□□ -1.48
CFTRP13569 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.81□□□□□ -1.48
CFTRP13569 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.81□□□□□ -1.48
CFTRP13569 RPS4XP2-201ENST00000458402 793 ntBASIC5.81□□□□□ -1.48
CFTRP13569 RN7SL863P-201ENST00000462370 296 ntBASIC5.81□□□□□ -1.48
CFTRP13569 AC004069.2-201ENST00000505438 1114 ntBASIC5.81□□□□□ -1.48
CFTRP13569 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.81□□□□□ -1.48
CFTRP13569 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CFTRP13569 AC087276.1-201ENST00000529659 480 ntBASIC5.81□□□□□ -1.48
CFTRP13569 SULT1C2P2-201ENST00000562517 294 ntBASIC5.81□□□□□ -1.48
CFTRP13569 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.81□□□□□ -1.48
CFTRP13569 BMS1P21-201ENST00000634565 365 ntBASIC5.81□□□□□ -1.48
CFTRP13569 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CFTRP13569 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CFTRP13569 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CFTRP13569 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CFTRP13569 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.8□□□□□ -1.48
CFTRP13569 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.8□□□□□ -1.48
CFTRP13569 RNA5SP52-201ENST00000362448 134 ntBASIC5.8□□□□□ -1.48
CFTRP13569 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CFTRP13569 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.8□□□□□ -1.48
CFTRP13569 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.8□□□□□ -1.48
CFTRP13569 MIR3945-201ENST00000581853 98 ntBASIC5.8□□□□□ -1.48
CFTRP13569 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.8□□□□□ -1.48
CFTRP13569 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CFTRP13569 AL022322.2-201ENST00000624072 20397 ntBASIC5.8□□□□□ -1.48
CFTRP13569 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CFTRP13569 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CFTRP13569 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CFTRP13569 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.8□□□□□ -1.48
CFTRP13569 AP000542.2-201ENST00000623199 6179 ntBASIC5.8□□□□□ -1.48
CFTRP13569 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CFTRP13569 AC092435.4-201ENST00000623012 4159 ntBASIC5.79□□□□□ -1.48
CFTRP13569 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CFTRP13569 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CFTRP13569 OR5H2-201ENST00000355273 945 ntBASIC5.79□□□□□ -1.48
CFTRP13569 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CFTRP13569 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CFTRP13569 RNU6-729P-201ENST00000384399 107 ntBASIC5.79□□□□□ -1.48
CFTRP13569 AL139095.1-201ENST00000404326 391 ntBASIC5.79□□□□□ -1.48
CFTRP13569 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CFTRP13569 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.79□□□□□ -1.48
CFTRP13569 ANP32BP2-201ENST00000454525 545 ntBASIC5.79□□□□□ -1.48
CFTRP13569 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC5.79□□□□□ -1.48
CFTRP13569 AC020914.4-201ENST00000597690 277 ntBASIC5.79□□□□□ -1.48
CFTRP13569 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.79□□□□□ -1.48
CFTRP13569 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CFTRP13569 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CFTRP13569 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.78□□□□□ -1.48
CFTRP13569 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CFTRP13569 RNA5SP229-201ENST00000410809 99 ntBASIC5.78□□□□□ -1.48
CFTRP13569 HMGB1P5-202ENST00000451497 985 ntBASIC5.78□□□□□ -1.48
CFTRP13569 AC004924.1-201ENST00000480160 781 ntBASIC5.78□□□□□ -1.48
CFTRP13569 TCP11X3P-202ENST00000514289 1254 ntBASIC5.78□□□□□ -1.48
CFTRP13569 PSMA2P1-201ENST00000526365 646 ntBASIC5.78□□□□□ -1.48
CFTRP13569 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.78□□□□□ -1.48
CFTRP13569 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.78□□□□□ -1.48
CFTRP13569 AC233263.6-201ENST00000631132 1963 ntBASIC5.78□□□□□ -1.48
CFTRP13569 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.78□□□□□ -1.48
CFTRP13569 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CFTRP13569 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CFTRP13569 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC5.78□□□□□ -1.48
CFTRP13569 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC5.78□□□□□ -1.48
CFTRP13569 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.77□□□□□ -1.49
CFTRP13569 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CFTRP13569 SNORA7.4-201ENST00000384249 137 ntBASIC5.77□□□□□ -1.49
CFTRP13569 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.77□□□□□ -1.49
CFTRP13569 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.77□□□□□ -1.49
CFTRP13569 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.77□□□□□ -1.49
CFTRP13569 IGHV3-29-201ENST00000604817 344 ntBASIC5.77□□□□□ -1.49
CFTRP13569 AC105227.2-201ENST00000615075 605 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms