Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA1P02708 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.31□□□□□ -1.72
CHRNA1P02708 AC087369.1-201ENST00000520775 996 ntBASIC4.31□□□□□ -1.72
CHRNA1P02708 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.31□□□□□ -1.72
CHRNA1P02708 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA1P02708 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA1P02708 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.31□□□□□ -1.72
CHRNA1P02708 AC022968.1-201ENST00000567372 442 ntBASIC4.31□□□□□ -1.72
CHRNA1P02708 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.31□□□□□ -1.72
CHRNA1P02708 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.31□□□□□ -1.72
CHRNA1P02708 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.31□□□□□ -1.72
CHRNA1P02708 AC008638.3-201ENST00000603341 463 ntBASIC4.31□□□□□ -1.72
CHRNA1P02708 AC025946.2-201ENST00000603398 234 ntBASIC4.31□□□□□ -1.72
CHRNA1P02708 AC005972.3-201ENST00000606304 481 ntBASIC4.31□□□□□ -1.72
CHRNA1P02708 AC242628.1-201ENST00000606810 391 ntBASIC4.31□□□□□ -1.72
CHRNA1P02708 AC104307.1-201ENST00000616142 196 ntBASIC4.31□□□□□ -1.72
CHRNA1P02708 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA1P02708 AL118508.4-201ENST00000624142 1176 ntBASIC4.31□□□□□ -1.72
CHRNA1P02708 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.31□□□□□ -1.72
CHRNA1P02708 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA1P02708 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA1P02708 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA1P02708 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHRNA1P02708 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CHRNA1P02708 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA1P02708 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CHRNA1P02708 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA1P02708 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA1P02708 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA1P02708 SNORD46.1-201ENST00000364139 104 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 RHOT1P2-201ENST00000366423 333 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA1P02708 AC009965.2-201ENST00000425328 970 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA1P02708 HIGD1AP4-201ENST00000430194 280 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 AC005229.2-201ENST00000456995 399 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA1P02708 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.3□□□□□ -1.72
CHRNA1P02708 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.3□□□□□ -1.72
CHRNA1P02708 AC007991.1-201ENST00000522680 631 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA1P02708 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA1P02708 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.3□□□□□ -1.72
CHRNA1P02708 GTF2IP22-201ENST00000554443 182 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.3□□□□□ -1.72
CHRNA1P02708 MIR3944-201ENST00000581277 108 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 MIR4512-201ENST00000583257 77 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.3□□□□□ -1.72
CHRNA1P02708 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.3□□□□□ -1.72
CHRNA1P02708 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.3□□□□□ -1.72
CHRNA1P02708 AC015849.2-201ENST00000605738 409 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 AC005344.1-201ENST00000613391 459 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 RMST_9.1-201ENST00000619945 193 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 AL034408.1-202ENST00000636088 415 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 AC009093.8-201ENST00000641769 292 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 AC090229.1-201ENST00000590983 1609 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA1P02708 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA1P02708 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.3□□□□□ -1.72
CHRNA1P02708 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.3□□□□□ -1.72
CHRNA1P02708 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CHRNA1P02708 AP004289.2-201ENST00000444413 1457 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 AC024560.2-201ENST00000507981 1497 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 MAPK10-372ENST00000641954 3413 ntBASIC4.3□□□□□ -1.72
CHRNA1P02708 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA1P02708 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA1P02708 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CHRNA1P02708 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA1P02708 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CHRNA1P02708 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CHRNA1P02708 RPL21P17-201ENST00000397467 475 ntBASIC4.29□□□□□ -1.72
CHRNA1P02708 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.29□□□□□ -1.72
CHRNA1P02708 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA1P02708 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.29□□□□□ -1.72
CHRNA1P02708 RPL34P26-201ENST00000445636 354 ntBASIC4.29□□□□□ -1.72
CHRNA1P02708 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.29□□□□□ -1.72
CHRNA1P02708 AC107398.1-201ENST00000486904 505 ntBASIC4.29□□□□□ -1.72
CHRNA1P02708 RN7SL271P-201ENST00000487601 295 ntBASIC4.29□□□□□ -1.72
CHRNA1P02708 AC025445.1-201ENST00000502728 300 ntBASIC4.29□□□□□ -1.72
CHRNA1P02708 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.29□□□□□ -1.72
CHRNA1P02708 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.29□□□□□ -1.72
CHRNA1P02708 FTH1P9-201ENST00000513251 355 ntBASIC4.29□□□□□ -1.72
CHRNA1P02708 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA1P02708 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CHRNA1P02708 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA1P02708 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.29□□□□□ -1.72
CHRNA1P02708 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.29□□□□□ -1.72
CHRNA1P02708 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.29□□□□□ -1.72
CHRNA1P02708 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.29□□□□□ -1.72
CHRNA1P02708 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.29□□□□□ -1.72
CHRNA1P02708 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.29□□□□□ -1.72
CHRNA1P02708 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.29□□□□□ -1.72
CHRNA1P02708 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.29□□□□□ -1.72
CHRNA1P02708 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.29□□□□□ -1.72
CHRNA1P02708 MIR548Y-201ENST00000582739 110 ntBASIC4.29□□□□□ -1.72
CHRNA1P02708 AL139395.1-201ENST00000603662 160 ntBASIC4.29□□□□□ -1.72
CHRNA1P02708 AC015802.5-201ENST00000607478 399 ntBASIC4.29□□□□□ -1.72
CHRNA1P02708 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.29□□□□□ -1.72
CHRNA1P02708 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.29□□□□□ -1.72
CHRNA1P02708 AC016957.2-201ENST00000616998 848 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms