Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 FDX1P2-201ENST00000450769 375 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.25□□□□□ -1.89
SPTA1P02549 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.25□□□□□ -1.89
SPTA1P02549 AC108022.1-201ENST00000493466 478 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.25□□□□□ -1.89
SPTA1P02549 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.25□□□□□ -1.89
SPTA1P02549 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.25□□□□□ -1.89
SPTA1P02549 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
SPTA1P02549 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
SPTA1P02549 SAMMSON-213ENST00000641336 1521 ntBASIC3.25□□□□□ -1.89
SPTA1P02549 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.25□□□□□ -1.89
SPTA1P02549 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.25□□□□□ -1.89
SPTA1P02549 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SPTA1P02549 AC093849.1-201ENST00000563631 2209 ntBASIC3.24□□□□□ -1.89
SPTA1P02549 AC093010.3-201ENST00000570269 15214 ntBASIC3.24□□□□□ -1.89
SPTA1P02549 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SPTA1P02549 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
SPTA1P02549 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SPTA1P02549 HIGD1AP12-201ENST00000427832 281 ntBASIC3.24□□□□□ -1.89
SPTA1P02549 AL035407.1-201ENST00000429211 571 ntBASIC3.24□□□□□ -1.89
SPTA1P02549 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.24□□□□□ -1.89
SPTA1P02549 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.24□□□□□ -1.89
SPTA1P02549 RPL31P61-201ENST00000496160 376 ntBASIC3.24□□□□□ -1.89
SPTA1P02549 AC025554.1-201ENST00000505641 188 ntBASIC3.24□□□□□ -1.89
SPTA1P02549 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.24□□□□□ -1.89
SPTA1P02549 RNA5SP341-201ENST00000516261 117 ntBASIC3.24□□□□□ -1.89
SPTA1P02549 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.24□□□□□ -1.89
SPTA1P02549 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.24□□□□□ -1.89
SPTA1P02549 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.24□□□□□ -1.89
SPTA1P02549 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SPTA1P02549 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SPTA1P02549 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.24□□□□□ -1.89
SPTA1P02549 AC010266.2-201ENST00000564741 3255 ntBASIC3.24□□□□□ -1.89
SPTA1P02549 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SPTA1P02549 OR5H2-201ENST00000355273 945 ntBASIC3.24□□□□□ -1.89
SPTA1P02549 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SPTA1P02549 AL034403.1-201ENST00000399414 885 ntBASIC3.24□□□□□ -1.89
SPTA1P02549 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.24□□□□□ -1.89
SPTA1P02549 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.24□□□□□ -1.89
SPTA1P02549 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.24□□□□□ -1.89
SPTA1P02549 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC3.24□□□□□ -1.89
SPTA1P02549 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.24□□□□□ -1.89
SPTA1P02549 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.24□□□□□ -1.89
SPTA1P02549 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SPTA1P02549 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.24□□□□□ -1.89
SPTA1P02549 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.24□□□□□ -1.89
SPTA1P02549 AC073073.2-201ENST00000609827 2578 ntBASIC3.24□□□□□ -1.89
SPTA1P02549 HSPA8P17-201ENST00000427029 1382 ntBASIC3.24□□□□□ -1.89
SPTA1P02549 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SPTA1P02549 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.24□□□□□ -1.89
SPTA1P02549 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.24□□□□□ -1.89
SPTA1P02549 Z95327.2-201ENST00000414579 1873 ntBASIC3.24□□□□□ -1.89
SPTA1P02549 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SPTA1P02549 SETP5-201ENST00000437270 562 ntBASIC3.23□□□□□ -1.89
SPTA1P02549 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.23□□□□□ -1.89
SPTA1P02549 AL121766.1-201ENST00000547436 487 ntBASIC3.23□□□□□ -1.89
SPTA1P02549 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.23□□□□□ -1.89
SPTA1P02549 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.23□□□□□ -1.89
SPTA1P02549 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.23□□□□□ -1.89
SPTA1P02549 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.23□□□□□ -1.89
SPTA1P02549 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SPTA1P02549 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SPTA1P02549 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SPTA1P02549 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SPTA1P02549 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.23□□□□□ -1.89
SPTA1P02549 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SPTA1P02549 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.23□□□□□ -1.89
SPTA1P02549 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.23□□□□□ -1.89
SPTA1P02549 RPL36AP10-201ENST00000421785 322 ntBASIC3.23□□□□□ -1.89
SPTA1P02549 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.23□□□□□ -1.89
SPTA1P02549 AC239809.1-201ENST00000450470 217 ntBASIC3.23□□□□□ -1.89
SPTA1P02549 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.23□□□□□ -1.89
SPTA1P02549 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC3.23□□□□□ -1.89
SPTA1P02549 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.23□□□□□ -1.89
SPTA1P02549 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.23□□□□□ -1.89
SPTA1P02549 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SPTA1P02549 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SPTA1P02549 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
SPTA1P02549 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
SPTA1P02549 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SPTA1P02549 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.22□□□□□ -1.89
SPTA1P02549 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.22□□□□□ -1.89
SPTA1P02549 AL359643.1-201ENST00000404109 423 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 GSTA8P-201ENST00000404253 637 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SPTA1P02549 TXNP1-201ENST00000441872 371 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 GTF3AP5-201ENST00000442645 697 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 RN7SL432P-201ENST00000484057 298 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 AC132942.1-201ENST00000486753 483 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 IGKV2-38-201ENST00000517443 247 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SPTA1P02549 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.22□□□□□ -1.89
SPTA1P02549 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.22□□□□□ -1.89
SPTA1P02549 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SPTA1P02549 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.22□□□□□ -1.89
SPTA1P02549 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SPTA1P02549 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SPTA1P02549 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms