Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC007685.1-201ENST00000329806 452 ntBASIC3.04□□□□□ -1.92
SDCBPO00560 MIR30E-201ENST00000362104 92 ntBASIC3.04□□□□□ -1.92
SDCBPO00560 SNORA62.2-201ENST00000364672 152 ntBASIC3.04□□□□□ -1.92
SDCBPO00560 RNU6-146P-201ENST00000384602 108 ntBASIC3.04□□□□□ -1.92
SDCBPO00560 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SDCBPO00560 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.04□□□□□ -1.92
SDCBPO00560 MTHFD2P2-201ENST00000407725 247 ntBASIC3.04□□□□□ -1.92
SDCBPO00560 MTND4P22-201ENST00000413116 1169 ntBASIC3.04□□□□□ -1.92
SDCBPO00560 ANP32BP2-201ENST00000454525 545 ntBASIC3.04□□□□□ -1.92
SDCBPO00560 AC022034.3-201ENST00000471393 478 ntBASIC3.04□□□□□ -1.92
SDCBPO00560 AC007537.2-201ENST00000472093 511 ntBASIC3.04□□□□□ -1.92
SDCBPO00560 RNU6-347P-201ENST00000516658 105 ntBASIC3.04□□□□□ -1.92
SDCBPO00560 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.04□□□□□ -1.92
SDCBPO00560 AC027281.1-201ENST00000574178 758 ntBASIC3.04□□□□□ -1.92
SDCBPO00560 AC087499.8-201ENST00000578406 226 ntBASIC3.04□□□□□ -1.92
SDCBPO00560 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SDCBPO00560 AL161912.3-201ENST00000605404 628 ntBASIC3.04□□□□□ -1.92
SDCBPO00560 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SDCBPO00560 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
SDCBPO00560 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.04□□□□□ -1.92
SDCBPO00560 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.04□□□□□ -1.92
SDCBPO00560 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SDCBPO00560 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.03□□□□□ -1.92
SDCBPO00560 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SDCBPO00560 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
SDCBPO00560 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SDCBPO00560 AC068647.1-201ENST00000489539 2265 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.03□□□□□ -1.92
SDCBPO00560 RNU4-7P-201ENST00000364758 141 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 RN7SKP156-201ENST00000410308 342 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
SDCBPO00560 RPL17P36-201ENST00000420302 549 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.03□□□□□ -1.92
SDCBPO00560 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.03□□□□□ -1.92
SDCBPO00560 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.03□□□□□ -1.92
SDCBPO00560 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.03□□□□□ -1.92
SDCBPO00560 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.03□□□□□ -1.92
SDCBPO00560 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.03□□□□□ -1.92
SDCBPO00560 AL354710.1-201ENST00000453641 246 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 UBDP1-202ENST00000457888 382 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.03□□□□□ -1.92
SDCBPO00560 RPL23AP14-201ENST00000468281 468 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 AP000926.1-201ENST00000479573 241 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.03□□□□□ -1.92
SDCBPO00560 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.03□□□□□ -1.92
SDCBPO00560 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.03□□□□□ -1.92
SDCBPO00560 AC093853.1-201ENST00000515689 483 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SDCBPO00560 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.03□□□□□ -1.92
SDCBPO00560 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.03□□□□□ -1.92
SDCBPO00560 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.03□□□□□ -1.92
SDCBPO00560 AC011602.1-201ENST00000546484 331 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.03□□□□□ -1.92
SDCBPO00560 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.03□□□□□ -1.92
SDCBPO00560 RN7SL703P-201ENST00000578485 302 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 MIR5685-201ENST00000579080 79 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 AC006077.1-201ENST00000604746 343 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.03□□□□□ -1.92
SDCBPO00560 SPATA2P1-201ENST00000431223 2055 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.03□□□□□ -1.92
SDCBPO00560 AC092079.1-201ENST00000558620 1985 ntBASIC3.03□□□□□ -1.92
SDCBPO00560 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SDCBPO00560 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
SDCBPO00560 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
SDCBPO00560 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SDCBPO00560 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.02□□□□□ -1.93
SDCBPO00560 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SDCBPO00560 EXOC5P1-201ENST00000510543 1969 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.02□□□□□ -1.93
SDCBPO00560 AL590704.1-201ENST00000402856 794 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 RN7SKP177-201ENST00000410567 355 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 RN7SKP263-201ENST00000411194 309 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.02□□□□□ -1.93
SDCBPO00560 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.02□□□□□ -1.93
SDCBPO00560 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SDCBPO00560 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SDCBPO00560 AL159169.1-201ENST00000421119 127 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.02□□□□□ -1.93
SDCBPO00560 TXNP1-201ENST00000441872 371 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.02□□□□□ -1.93
SDCBPO00560 RPS3AP46-201ENST00000448352 682 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 NUTF2P7-201ENST00000453086 375 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 AC006539.3-201ENST00000454258 129 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 RPS4XP22-201ENST00000480755 780 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 AC110768.1-201ENST00000509222 400 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.02□□□□□ -1.93
SDCBPO00560 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.02□□□□□ -1.93
SDCBPO00560 SNORA70.14-201ENST00000516205 110 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.02□□□□□ -1.93
SDCBPO00560 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.02□□□□□ -1.93
SDCBPO00560 OR8X1P-201ENST00000534542 869 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SDCBPO00560 AC025423.2-201ENST00000537570 439 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.02□□□□□ -1.93
SDCBPO00560 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.02□□□□□ -1.93
SDCBPO00560 MIR5187-201ENST00000583479 76 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SDCBPO00560 AC022916.3-201ENST00000592961 742 ntBASIC3.02□□□□□ -1.93
SDCBPO00560 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms