Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RNA5SP397-201ENST00000391323 118 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 LIPT1P1-201ENST00000415870 1186 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 RPS15AP6-201ENST00000420703 385 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AC245028.1-201ENST00000423259 256 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AL358472.1-201ENST00000431295 329 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 CEACAMP9-201ENST00000442990 513 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 RNU7-170P-201ENST00000459303 61 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 RN7SL354P-201ENST00000469282 294 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 KRT19P6-201ENST00000510983 209 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AC090877.1-201ENST00000561418 344 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AC005191.1-201ENST00000603950 358 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AC103710.3-201ENST00000608157 948 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AC022079.2-201ENST00000619739 566 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AL445363.3-201ENST00000623080 671 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 ATE1-AS1-202ENST00000636460 506 ntBASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RBFOX3A6NFN3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 OR5P1P-201ENST00000299512 925 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 RNA5SP167-201ENST00000365461 116 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 CYB5AP4-201ENST00000396692 399 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 RNA5SP36-201ENST00000410197 133 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 RPL7AP73-201ENST00000413490 353 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 RPL7AP25-201ENST00000423357 805 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 TPTE2P1-204ENST00000435256 593 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AL138878.2-201ENST00000440581 1241 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC006011.1-201ENST00000442758 349 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 HMGB3P8-201ENST00000449709 577 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC009963.2-201ENST00000453431 138 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC006539.3-201ENST00000454258 129 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC010326.1-201ENST00000462726 602 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 RPL12P20-201ENST00000475538 479 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AP001086.1-201ENST00000494882 321 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC093720.1-201ENST00000505681 714 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 PCBP2P3-201ENST00000509726 843 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC005351.1-201ENST00000511152 786 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 RNU6-760P-201ENST00000516078 97 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC008562.1-201ENST00000521763 330 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 CENPUP2-201ENST00000555897 1186 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC011492.1-201ENST00000600023 315 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC112503.1-201ENST00000608436 391 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 MIR6748-201ENST00000610433 71 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 AC012531.5-201ENST00000611375 151 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RBFOX3A6NFN3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms