Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNX9Q9Y5X1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC092435.4-201ENST00000623012 4159 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AL049555.1-201ENST00000562834 1933 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AL158163.1-201ENST00000603915 1649 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 RNA5SP175-201ENST00000364275 119 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 MIR195-201ENST00000385194 87 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AL583835.1-201ENST00000399570 407 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 MTND4P13-201ENST00000402078 1023 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 RAB28P1-201ENST00000411517 641 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 NRBF2P2-201ENST00000413087 861 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 HIGD1AP15-201ENST00000416198 280 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 MTND2P16-201ENST00000419987 799 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 EIF4EP1-201ENST00000422311 642 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 IPMKP1-201ENST00000425988 855 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 FO393419.3-201ENST00000428741 282 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 CETN4P-201ENST00000432407 469 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 GTF2IP3-201ENST00000433887 494 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 MTCO1P52-201ENST00000433928 531 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 ACTR3P2-201ENST00000439585 1257 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 VN1R25P-201ENST00000443385 738 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC097499.1-201ENST00000444277 208 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 GEMIN8P3-201ENST00000445417 720 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 MTCYBP11-201ENST00000447254 1109 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC005008.1-201ENST00000456151 612 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 RPL23AP65-201ENST00000475608 468 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC090013.1-201ENST00000485147 480 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 SNORD116-26-201ENST00000516006 96 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 ATP5J2P6-201ENST00000565203 266 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 HNRNPCP4-201ENST00000571636 900 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 MIR3138-201ENST00000585238 82 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AL354984.3-201ENST00000604803 325 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 ARF4P1-201ENST00000605447 541 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC015813.4-201ENST00000610469 179 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC139769.3-201ENST00000618383 175 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC073569.3-201ENST00000619055 682 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC011330.2-201ENST00000621680 635 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC140113.4-201ENST00000622087 222 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC024023.1-201ENST00000624530 922 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC139713.2-210ENST00000641741 992 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC027290.2-201ENST00000623210 18662 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 AC012020.1-201ENST00000624541 1728 ntBASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNX9Q9Y5X1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SNX9Q9Y5X1 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SNX9Q9Y5X1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SNX9Q9Y5X1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.65□□□□□ -1.66
SNX9Q9Y5X1 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
SNX9Q9Y5X1 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.65□□□□□ -1.66
SNX9Q9Y5X1 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.65□□□□□ -1.66
SNX9Q9Y5X1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
SNX9Q9Y5X1 RNU1-132P-201ENST00000364300 164 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 RNU4-28P-201ENST00000364739 141 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 OR6C69P-201ENST00000394268 893 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AL078604.1-201ENST00000404609 466 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 HMGB1P13-201ENST00000406019 642 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 RN7SKP167-201ENST00000411047 285 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AL132765.1-201ENST00000434165 553 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 MTCO2P20-201ENST00000437339 673 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 PTGES3P1-201ENST00000439531 483 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 Z77249.1-201ENST00000444622 1175 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.65□□□□□ -1.67
SNX9Q9Y5X1 OR51B8P-201ENST00000449892 769 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms